LOCUS BC011204 1988 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens family with sequence similarity 83, member F, mRNA
(cDNA clone MGC:17507 IMAGE:3455576), complete cds.
ACCESSION BC011204
VERSION BC011204.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1988)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1988)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: l Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923962.
FEATURES Location/Qualifiers
source 1..1988
/db_xref="H-InvDB:HIT000035193"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17507 IMAGE:3455576"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1988
/gene="FAM83F"
/db_xref="GeneID:113828"
/db_xref="HGNC:HGNC:25148"
CDS 453..1451
/gene="FAM83F"
/codon_start=1
/product="family with sequence similarity 83, member F"
/protein_id="AAH11204.1"
/db_xref="GeneID:113828"
/db_xref="HGNC:HGNC:25148"
/translation="MDLFTDGDIFQDIVDAACKRRVPVYIILDEAGVKYFLEMCQDLQ
LTDFRIRNIRVRSVTGVGFYMPMGRIKGTLSSRFLMVDGDKVATGSYRFTWSSSHVDR
NLLLLLTGQNVEPFDTEFRELYAISEEVDLYRQLSLAGRVGLHYSSTVARKLINPKYA
LVSGCRHPPGEMMRWAARQQWEAGGNPEGQEEGASGGESAWRLESFLKDLVTVEQVLP
PVEPIPLGELSQKDGRMVSHMHRDLKPKSREAPSRNGMGEAARGEAAPARRFSSRLFS
RRAKRPAAPNGMASSVSTETSEVEFLTGKRPNENSSADISGKTSPSSAKPSNCVIS"
BASE COUNT 446 a 550 c 597 g 395 t
ORIGIN
1 ggggagtgcc tgtgtggctg agggacacgt ccaagctgca gtcggctctg tggttgtgga
61 cacctggcag aaccatgcct tctctagtct gggtcatcca aacacacgtg gggtgcaggg
121 gccaggtgga gccctcttgt cgtttttgtt atctaacggt aattacggag tccagaaaga
181 gaattggaaa tgccggcagt ttaattaaag ctgaatggca ggagaggggc atttggaggc
241 tccctccctg ccttcactcc ccgtcctgcc gcccaggcag gatgtcagat gaggagacgt
301 tgagctcatc aaacacccaa tgagaagtct tacaacatca gaagctgtct gccaatgcgc
361 ctgcgacagc ttatagaaac tgctgccgcc tcgaatcaac ctctctcccc aggcattgca
421 cgtcagtagg taaccaggtc attgctgtgg tcatggacct cttcactgat ggtgatatct
481 ttcaagacat tgtggatgct gcctgtaagc gccgggtccc agtgtacatc atcctggacg
541 aggcaggagt gaagtatttc ctggagatgt gtcaggacct gcagctcact gacttccgga
601 ttcggaacat ccgtgtccgc tctgtgacag gcgtcggctt ctacatgccc atggggagga
661 tcaaggggac cctgtcatca aggttcctga tggtggacgg tgacaaagtg gccactggat
721 cttacaggtt cacctggagt tcctcccatg tggacagaaa cctcctcctg ctcctgacag
781 gacagaacgt agagcccttt gacacggagt tccgggagct gtacgccatc tccgaggagg
841 tggacttgta ccggcagctg agcctggcgg gcagggttgg cctccattac tcctccactg
901 tggctcgaaa gcttatcaac cccaagtacg ccttggtgtc aggctgccgc cacccgcctg
961 gggagatgat gcgctgggct gcccggcaac agtgggaggc gggcggcaac ccggaggggc
1021 aggaggaggg cgccagcggt ggcgagtcgg cctggcgcct ggagagcttc ctgaaagacc
1081 tggttacggt ggagcaggtg ctgccccccg tggagcccat ccccttggga gagctgagcc
1141 agaaggatgg caggatggtc tctcacatgc acagagacct gaagcccaaa tcccgagagg
1201 cacccagccg aaacggcatg ggagaagcgg cccgggggga ggccgccccc gccaggcgct
1261 tcagcagcag gctcttcagt cgccgagcca agaggcctgc ggcgcccaat ggcatggcca
1321 gctctgtctc caccgagacc tctgaagtgg agtttctgac ggggaagagg cccaacgaga
1381 attccagtgc tgacatctca ggtaaaacaa gtcccagttc tgccaagcct agcaactgtg
1441 tgatttcctg agctgcggga tggtggtggg caggacgtgt ggatgcctgc ctgccctgcc
1501 ctgtgctgtg gagagcgcag gtcgcacact gcaccagttt gcacatcaga cgccaactgg
1561 ccttctgccc tgcagcctcc gtcctggcct cagggacgct ggatcccaaa tgagagggtc
1621 cgaagcatct cagtcacacg cctccaccgg actgtcggtg gctgggcagg ggtcagtgcc
1681 acggcctcct tgtttacatg aagtggaagc ttgaccagtg tctgctcgcc tttgtgcccc
1741 accccctccg ctgattgcca gatggggtga gggcccattc tttaaacctt tatggggtgg
1801 ggtgtctggg gcagctgcag tggcttctcc tttcccaggc ttcctggtgc ttctggttcc
1861 ccacgccact ccccacccaa gagattggtg gaataaaagg gaagagggca gggccctgag
1921 cctggaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1981 aaaaaaaa
//