LOCUS BC011180 922 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens protein phosphatase 2 (formerly 2A), regulatory
subunit B'', beta, mRNA (cDNA clone IMAGE:4150858), partial cds.
ACCESSION BC011180
VERSION BC011180.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 922)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 922)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: o Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41349490.
FEATURES Location/Qualifiers
source 1..922
/db_xref="H-InvDB:HIT000035192_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4150858"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..922
/gene="PPP2R3B"
/gene_synonym="NY-REN-8"
/gene_synonym="PPP2R3LY"
/gene_synonym="PR48"
/db_xref="GeneID:28227"
/db_xref="HGNC:HGNC:13417"
/db_xref="MIM:300339"
CDS <1..769
/gene="PPP2R3B"
/gene_synonym="NY-REN-8"
/gene_synonym="PPP2R3LY"
/gene_synonym="PR48"
/codon_start=2
/product="PPP2R3B protein"
/protein_id="AAH11180.2"
/db_xref="GeneID:28227"
/db_xref="HGNC:HGNC:13417"
/db_xref="MIM:300339"
/translation="CKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAVTRGR
KVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCR
RLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDH
EQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGFEAELSPVEQKL
SALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL"
BASE COUNT 224 a 264 c 282 g 152 t
ORIGIN
1 ctgcaagttc tgggagctgg acacggacca cgacctgctc atcgacgcgg acgacctggc
61 gcggcacaat gaccacgccc tttctaccaa gatgatagac aggatcttct caggagcagt
121 cacacgaggc agaaaagtgc agaaggaagg gaagatcagc tatgccgact ttgtctggtt
181 tttgatctct gaggaagaca aaaaaacacc gaccagcatc gagtactggt tccgctgcat
241 ggacctggac ggggacggcg ccctgtccat gttcgagctc gagtacttct acgaggagca
301 gtgccgaagg ctggacagca tggccatcga ggccctgccc ttccaggact gcctctgcca
361 gatgctggac ctggtcaagc cgaggactga agggaagatc acgctgcagg acctgaagcg
421 ctgcaagctg gccaacgtct tcttcgacac cttcttcaac atcgagaagt acctcgacca
481 cgagcagaaa gagcagatct ccctgctcag ggacggtgac agcggcggcc ccgagctctc
541 ggactgggag aagtacgcgg ccgaggagta cgacatcctg gtggccgagg agaccgcggg
601 agagccctgg gaggacgggt tcgaggccga gctcagccct gtggagcaga agctgagtgc
661 gctgcgctcc ccgctggccc agaggccctt cttcgaggcg ccctcaccgc tgggcgccgt
721 ggacctgtac gagtacgcat gcggggacga ggacctggag ccgctgtgac gccgcccgcg
781 agaacgccgc cgcggggccg ctccccacgt gccaccaccg ggccaccgcg gctcgtgtaa
841 aaactgttgt ggaaaatgag tgcgtttgta cggaatgata aacttttatt tattcaaaaa
901 aaaaaaaaaa aaaaaaaaaa aa
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