LOCUS BC011177 712 bp mRNA linear HUM 03-NOV-2008 DEFINITION Homo sapiens vascular endothelial growth factor A, mRNA (cDNA clone IMAGE:4150451), partial cds. ACCESSION BC011177 VERSION BC011177.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 712) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 712) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 19 Row: i Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 71051577. FEATURES Location/Qualifiers source 1..712 /db_xref="H-InvDB:HIT000087603" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4150451" /tissue_type="Brain, glioblastoma with EGFR amplification" /clone_lib="NCI_CGAP_Brn64" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..>712 /gene="VEGFA" /gene_synonym="VEGF-A" /gene_synonym="VPF" /db_xref="GeneID:7422" /db_xref="HGNC:HGNC:12680" /db_xref="MIM:192240" CDS <1..>712 /gene="VEGFA" /gene_synonym="VEGF-A" /gene_synonym="VPF" /codon_start=1 /product="VEGFA protein" /protein_id="AAH11177.2" /db_xref="GeneID:7422" /db_xref="HGNC:HGNC:12680" /db_xref="MIM:192240" /translation="PSPSYHLLPGRRRTVDAAASRGQGPEPAPGGGVEGVGARGVALK LFVQLLGCSRFGGAVVRAGEAEPSGAARSASSGREEPQPEEGEEEEEKEEERGPQWRL GARKPGSWTGEAAVCADSAPAARAPQALARASGRGGRVARRGAEESGPPHSPSRRGSA SRAGPGRASETMNFLLSWVHWSLALLLYLHHAKVSGRALLAPRAAASASPGWGRACER ARGGSVPHAGPWEKKKKKK" BASE COUNT 117 a 225 c 288 g 82 t ORIGIN 1 cccagcccca gctaccacct cctccccggc cggcggcgga cagtggacgc ggcggcgagc 61 cgcgggcagg ggccggagcc cgcgcccgga ggcggggtgg agggggtcgg ggctcgcggc 121 gtcgcactga aacttttcgt ccaacttctg ggctgttctc gcttcggagg agccgtggtc 181 cgcgcggggg aagccgagcc gagcggagcc gcgagaagtg ctagctcggg ccgggaggag 241 ccgcagccgg aggaggggga ggaggaagaa gagaaggaag aggagagggg gccgcagtgg 301 cgactcggcg ctcggaagcc gggctcatgg acgggtgagg cggcggtgtg cgcagacagt 361 gctccagccg cgcgcgctcc ccaggccctg gcccgggcct cgggccgggg aggaagagta 421 gctcgccgag gcgccgagga gagcgggccg ccccacagcc cgagccggag agggagcgcg 481 agccgcgccg gccccggtcg ggcctccgaa accatgaact ttctgctgtc ttgggtgcat 541 tggagccttg ccttgctgct ctacctccac catgccaagg taagcggtcg tgccctgctg 601 gcgccgcggg ccgctgcgag cgcctctccc ggctggggac gtgcgtgcga gcgcgcgcgt 661 gggggctccg tgccccacgc gggtccatgg gaaaaaaaaa aaaaaaaaaa aa //