LOCUS BC011175 576 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens TYRO protein tyrosine kinase binding protein, mRNA (cDNA clone MGC:17097 IMAGE:4150408), complete cds. ACCESSION BC011175 VERSION BC011175.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 576) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 576) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 19 Row: a Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 38157998. FEATURES Location/Qualifiers source 1..576 /db_xref="H-InvDB:HIT000035190" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17097 IMAGE:4150408" /tissue_type="Brain, glioblastoma with EGFR amplification" /clone_lib="NCI_CGAP_Brn64" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..576 /gene="TYROBP" /gene_synonym="DAP12" /gene_synonym="KARAP" /db_xref="GeneID:7305" /db_xref="HGNC:HGNC:12449" /db_xref="MIM:604142" CDS 57..398 /gene="TYROBP" /gene_synonym="DAP12" /gene_synonym="KARAP" /codon_start=1 /product="TYRO protein tyrosine kinase binding protein" /protein_id="AAH11175.1" /db_xref="GeneID:7305" /db_xref="HGNC:HGNC:12449" /db_xref="MIM:604142" /translation="MGGLEPCSRLLLLPLLLAVSGLRPVQAQAQSDCSCSTVSPGVLA GIVMGDLVLTVLIALAVYFLGRLVPRGRGAAEAATRKQRITETESPYQELQGQRSDVY SDLNTQRPYYK" BASE COUNT 133 a 184 c 154 g 105 t ORIGIN 1 cgctgcgcca catcccaccg gcccttacac tgtggtgtcc agcagcatcc ggcttcatgg 61 ggggacttga accctgcagc aggctcctgc tcctgcctct cctgctggct gtaagtggtc 121 tccgtcctgt ccaggcccag gcccagagcg attgcagttg ctctacggtg agcccgggcg 181 tgctggcagg gatcgtgatg ggagacctgg tgctgacagt gctcattgcc ctggccgtgt 241 acttcctggg ccggctggtc cctcgggggc gaggggctgc ggaggcagcg acccggaaac 301 agcgtatcac tgagaccgag tcgccttatc aggagctcca gggtcagagg tcggatgtct 361 acagcgacct caacacacag aggccgtatt acaaatgagc ccgaatcatg acagtcagca 421 acatgatacc tggatccagc cattcctgga gcccaccctg cacctcattc caactcctac 481 cgcgatacag acccacagag tgccatccct gagagaccag accgctcccc aatactctcc 541 taaaataaac atgaagcaca aaaaaaaaaa aaaaaa //