LOCUS BC011050 2048 bp mRNA linear HUM 24-MAR-2004
DEFINITION Homo sapiens chromosome 5 open reading frame 13, mRNA (cDNA clone
MGC:17077 IMAGE:4340005), complete cds.
ACCESSION BC011050
VERSION BC011050.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2048)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2048)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: p Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4758865.
FEATURES Location/Qualifiers
source 1..2048
/db_xref="H-InvDB:HIT000258943"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17077 IMAGE:4340005"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2048
/gene="C5orf13"
/gene_synonym="D4S114"
/gene_synonym="P311"
/gene_synonym="PRO1873"
/gene_synonym="PTZ17"
/db_xref="GeneID:9315"
/db_xref="MIM:607332"
CDS 205..411
/gene="C5orf13"
/gene_synonym="D4S114"
/gene_synonym="P311"
/gene_synonym="PRO1873"
/gene_synonym="PTZ17"
/codon_start=1
/product="C5orf13 protein"
/protein_id="AAH11050.1"
/db_xref="GeneID:9315"
/db_xref="MIM:607332"
/translation="MVYYPELFVWVSQEPFPNKDMEGRLPKGRLPVPKEVNRKKNDET
NAASLTPLGSSELRSPRISYLHFF"
BASE COUNT 540 a 447 c 443 g 618 t
ORIGIN
1 ggcgcggcga gcggggcgcc cggggcgcgg gtgcggggtg tcggggcgcg cgcgcctgtt
61 ggccgctcgc cgacggggcc cagagccgcc gattcctgcc gagtgtagag aggagagaga
121 gtgaacaggg agcggggctt ttgtctgttg gtctccctgg actgaagaga gggagaatag
181 aagcccaaga ctaagattct caaaatggtt tattacccag aactctttgt ctgggtcagt
241 caagaaccat ttccaaacaa ggacatggag ggaaggcttc ctaagggaag acttcctgtc
301 ccaaaggaag tgaaccgcaa gaagaacgat gagacaaacg ctgcctccct gactccactg
361 ggcagcagtg aactccgctc cccaagaatc agttacctcc acttttttta atcgtaacac
421 ctccatttgt attacatatg gtgtatgggt attgatgagg tcatggtatc atatatggga
481 tttttttctg tgtaaatcat caagtataag aagaaactat gggactctga gccttgcttt
541 agagaattta cagtggacaa ataggtgtca tcaaaccagt ttttaatcat tctgactcaa
601 gtgaaaacgc tcagaatttc acactgtgaa tccacgttta caacccttac aggtgggcct
661 tcaggcctgg ttcgctacaa caatgtcttc cacaactcaa actcccaccg cgctcacaca
721 accggtccac tcctgccttt tcactcacac agctcccgac tgcttcttgc agaggctgag
781 agtccccccc ccccaccttt tttttcattt agatgtaaca aacctagtag tttatgttca
841 tcaattgtct gtatatctct atattttatc catgtactct tttgatgtat agaagtagtt
901 tgaaactcat tgtttccttg tggtaagtga ccgagatgct gccacaggac ctgagacact
961 gatgaatggt gctattttgg actttcaaca tgctccttgg cgaggtagct ctgatggagt
1021 tattttttat ttccatgttc taagaaggtg ttggtactct gtttccctga atgttgttct
1081 ctagactgga ttgacttgtt ttccttgtgt cttcagtgtg gctttcttcc tcagtgttgt
1141 aggttgagcg aatgctacca gagtgtgaga gaccattgtc tcgttggctg gcgctcacgg
1201 acatgcagtc acggtagcgg gagcaatcac aaaactgtaa tttacttacc aaatctcttc
1261 ctttccatag cctcgcctgc ctgacttaga gaaagaaaag caataatttt acaggcattt
1321 tgaggtgtct ctttctttgg gttctttctg tttgaaagga tatttgtcga aaaaaagagc
1381 aaaaccgttt taaataaact ccccctggaa aaaaacccaa aacactggca tctgagtagg
1441 aatatgaaaa tgacaccttt tccaaatatt aaattggaaa acaaggtcta caaaatcatg
1501 atactttttt aaaaggcaga gcattctttt ttcggcaatt ttgataagca aggtgtagat
1561 ttacattttt gtccttgctc ccaacgaaat ggataaacaa aaataactta ccatctactc
1621 atggaatgtt gttgtgttag ccagtctgaa agcccacctt aatttttata taactgtctt
1681 tagctcttct tttgacaggg caggccttgt tctgaactgt ttcgcttctg actgttaaac
1741 accgatgacg catgcactgc acttcttcgt tttcttcttg ctcccccatt ggcctgagtt
1801 tcttgtgcat tactcctctc cctccttcgt tagaataggt atatcagctg tgtaaataga
1861 gcaagaaaac agtattctgc atctgtggca tttatgtaga gttgcagttg tgtactgcta
1921 aaaatgcagg cttttgtaac agtgtgatct ttactgatgc actcatgaca agtacccaat
1981 gtattttagc tattttagta gtatttgttc aataaatacg caagctgtaa ggtaaaaaaa
2041 aaaaaaaa
//