LOCUS BC011034 1465 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens butyrobetaine (gamma), 2-oxoglutarate dioxygenase
(gamma-butyrobetaine hydroxylase) 1, mRNA (cDNA clone MGC:13676
IMAGE:4042355), complete cds.
ACCESSION BC011034
VERSION BC011034.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1465)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1465)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: a Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4502368.
FEATURES Location/Qualifiers
source 1..1465
/db_xref="H-InvDB:HIT000035176"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13676 IMAGE:4042355"
/tissue_type="Kidney"
/clone_lib="NIH_MGC_75"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1465
/gene="BBOX1"
/gene_synonym="BBH"
/gene_synonym="G-BBH"
/gene_synonym="gamma-BBH"
/db_xref="GeneID:8424"
/db_xref="HGNC:HGNC:964"
/db_xref="MIM:603312"
CDS 57..1220
/gene="BBOX1"
/gene_synonym="BBH"
/gene_synonym="G-BBH"
/gene_synonym="gamma-BBH"
/codon_start=1
/product="butyrobetaine (gamma), 2-oxoglutarate
dioxygenase (gamma-butyrobetaine hydroxylase) 1"
/protein_id="AAH11034.1"
/db_xref="GeneID:8424"
/db_xref="HGNC:HGNC:964"
/db_xref="MIM:603312"
/translation="MACTIQKAEALDGAHLMQILWYDEEESLYPAVWLRDNCPCSDCY
LDSAKARKLLVEALDVNIGIKGLIFDRKKVYITWPDEHYSEFQADWLKKRCFSKQARA
KLQRELFFPECQYWGSELQLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPG
EVSKLGKRMGFLYLTFYGHTWQVQDKIDANNVAYTTGKLSFHTDYPALHHPPGVQLLH
CIKQTVTGGDSEIVDGFNVCQKLKKNNPQAFQILSSTFVDFTDIGVDYCDFSVQSKHK
IIELDDKGQVVRINFNNATRDTIFDVPVERVQPFYAALKEFVDLMNSKESKFTFKMNP
GDVITFDNWRLLHGRRSYEAGTEISRHLEGAYADWDVVMSRLRILRQRVENGN"
BASE COUNT 465 a 287 c 309 g 404 t
ORIGIN
1 gggactgatt tgtcatagca ggtagctgac agcatctact cctgaagacc ggaaacatgg
61 cttgtaccat ccaaaaggca gaagcacttg acggggctca tttgatgcag atcctctggt
121 atgatgagga agagtctctc tacccagctg tatggttgag agacaactgt ccgtgctctg
181 attgctacct ggattctgca aaagcacgga aacttctagt ggaagctctt gatgtgaaca
241 ttggaattaa aggcttgata tttgacagaa aaaaggtgta catcacatgg cccgatgagc
301 attacagtga attccaggct gattggctga agaaaagatg cttttccaag caggccagag
361 caaagctcca aagagaattg ttttttccag aatgccaata ctggggctca gagctccagc
421 tacccacttt ggattttgaa gatgttttaa gatatgatga acatgcatac aagtggctct
481 ccaccctcaa gaaagtaggc atagtaagac tcaccggagc atctgacaaa ccaggagaag
541 tttcaaaact tgggaaaagg atgggtttcc tctatctcac attttatgga catacttggc
601 aagtgcaaga caaaatcgat gcaaacaatg tggcttacac aactgggaag ctaagctttc
661 acactgatta tccagccctc catcatccac ctggggttca gcttcttcac tgcataaagc
721 aaacagtcac agggggtgat tcagaaattg tagatgggtt taatgtgtgc caaaaactaa
781 agaaaaataa tcctcaggca ttccagattt tgtcctctac ctttgtggac tttacagaca
841 ttggagtgga ttactgtgat ttttctgtac aatcaaaaca taaaattata gagttagatg
901 ataaaggcca agtggttcgc atcaacttca ataacgcaac tagggacaca atatttgatg
961 tacctgttga aagagttcag cctttttatg ctgctctgaa ggagtttgtt gacctcatga
1021 acagcaaaga atccaagttt accttcaaga tgaatccagg tgatgtgatt acttttgata
1081 actggcgctt acttcatggc cgacgtagct atgaagcagg aactgagata tcccgccatc
1141 tagaaggagc ttatgctgac tgggatgtgg tcatgtcaag gcttcgtatc ttaaggcaga
1201 gggtggagaa tggaaactga agtcacctgt agataatttt aataagattc caatgaccat
1261 attttgtgag atatggcaca ttattcacag accatgatct ttgtgattta catataattt
1321 ccttaacaat gaacatgtaa cttctctcac aagagtactc tttacttcgt aatcatatac
1381 aatgtcaact ttttagatgt ttcaccactc ttttgcaaat aaagcatcct ttctgctcaa
1441 aaaaaaaaaa aaaaaaaaaa aaaaa
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