LOCUS BC011033 1438 bp mRNA linear HUM 22-SEP-2005
DEFINITION Homo sapiens ATG12 autophagy related 12 homolog (S. cerevisiae),
mRNA (cDNA clone IMAGE:4103628), complete cds.
ACCESSION BC011033
VERSION BC011033.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1438)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1438)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: f Column: 22
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1438
/db_xref="H-InvDB:HIT000035175"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4103628"
/tissue_type="Brain, glioblastoma"
/clone_lib="NIH_MGC_57"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1438
/gene="ATG12"
/gene_synonym="APG12"
/gene_synonym="HAPG12"
/db_xref="GeneID:9140"
CDS 18..242
/gene="ATG12"
/gene_synonym="APG12"
/gene_synonym="HAPG12"
/codon_start=1
/product="ATG12 protein"
/protein_id="AAH11033.1"
/db_xref="GeneID:9140"
/translation="MAEEPQSVLQLPTSIAAGGEGLTDVSPETTTPEPPSSAAVSPGT
EEPAGDTKKKIYLCESVLCSFPRPRSWNSL"
BASE COUNT 444 a 266 c 290 g 438 t
ORIGIN
1 gggggtctcc aagcaagatg gcggaggagc cgcagtctgt gttgcagctt cctacttcaa
61 ttgctgctgg aggggaagga cttacggatg tctccccaga aacaaccacc ccggagcccc
121 cgtcttccgc tgcagtttcc ccgggaacag aggaacctgc tggcgacacc aagaaaaaaa
181 tttatttatg tgaatcagtc ctttgctcct tccccagacc aagaagttgg aactctctat
241 gagtgttttg gcagtgatgg taaactggtt ttacattact gcaagtctca ggcgtgggga
301 tgaaccacaa agaaaatcaa cttgctacta catgaaatgg attttcacgg aagagacagc
361 tctgaaaagt tttgatgctt gtggcaagag acttaacaga tgtgatctat ttagtatgtg
421 tctactctat gtttatgcat aagaaaacat ccatagcatg aatggactca gaaaaatgtg
481 atttgtatta atgcaccagt catcataaaa gatggtcatg atagtacacc cattgctcct
541 acttgttact attattgctg cagatctgcc tccaaggttg aaaaggagac taagactgta
601 taaacatctt cattgtcagt tctcaaaatg actgaaattg ttttcatggt aaaagttaat
661 atactaaagg gttccttttt ttttaatgtt tacatttatc tctatgttta cctttttagt
721 cacattgacc tgctggctga atacctcaaa tagtccagta gagggcagtc caccaggcag
781 aaaaggttag gcgttttggt ttcacatctt tgctggggaa taatagggga aatggctgtt
841 tttgctaatt tttagctaat atctagccag gagagcaagc acataggaca gactgaaaga
901 ctgtaatttt acacaataca catggcttaa ttattttatt gggatacaga aaaatataaa
961 ttctggacaa ataagtcata tacctgtttt cagtcctaac atttaaggat tcttgagtcc
1021 caatcacata actgtggtgt tactctgtca tttatatggt gtcaaaagca cttgatgagt
1081 aaacccagta gcatcttttt gagtgtttca taatgcattt tccaacttga aaacaataat
1141 tgaaaaatag ccttattgta tattttatgc catgactaaa agtgccattt ttactgatgc
1201 tattagactg ataatttctt gaagtgaaat ttaacctttt tttctcttta gtattatgtt
1261 tataatgcca tatttttaga aagcattcca gatcaggcat ggtggcttac acctgtaatc
1321 ccagcacttt ggaaggctga ggtgtgggga ttgcgtgaag ccacaagttt gagaccagcc
1381 tggttagcaa ggcaagatcc ccaactctgc aaaaaaaaaa aaaaaaaaaa aaaaaaaa
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