LOCUS BC011026 1676 bp mRNA linear HUM 17-AUG-2004 DEFINITION Homo sapiens ataxin 1, mRNA (cDNA clone IMAGE:4290737), partial cds. ACCESSION BC011026 VERSION BC011026.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1676) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1676) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 19 Row: n Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4506792. FEATURES Location/Qualifiers source 1..1676 /db_xref="H-InvDB:HIT000087590" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4290737" /tissue_type="Skeletal Muscle" /clone_lib="NIH_MGC_81" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene <1..1676 /gene="ATXN1" /gene_synonym="ATX1" /gene_synonym="D6S504E" /gene_synonym="SCA1" /db_xref="GeneID:6310" /db_xref="MIM:601556" CDS <1..345 /gene="ATXN1" /gene_synonym="ATX1" /gene_synonym="D6S504E" /gene_synonym="SCA1" /codon_start=1 /product="ATXN1 protein" /protein_id="AAH11026.1" /db_xref="GeneID:6310" /db_xref="MIM:601556" /translation="GEERAEYTADIISTTVAEPYRTCFTAGGSKTSPVEQQPEQQQPQ DIVSLLLPPLPHATPDPFTLYSHRTESAGGHLFLPQDLRWKSPGLGVFAVQSVYELAR RHNVSPFYSGPP" BASE COUNT 514 a 333 c 332 g 497 t ORIGIN 1 ggggaggaga gagcagagta taccgcagac atcatttcta ctacagtggc ggagccgtac 61 aggacctgtt tcactgcagg gggatccaaa acaagccccg tggagcagca gccagagcaa 121 cagcagccgc aagacattgt ttctctcctt ctgccccccc ttccccacgc aaccccagat 181 ccatttacac tttacagtca cagaacagaa agtgctggtg gacatctctt cttgccccaa 241 gatcttcgtt ggaagtcccc gggacttggt gtctttgccg ttcaaagtgt ttatgaactc 301 gccaggaggc ataatgtgtc accattttat tctgggccac cctaaaggat gacacccagc 361 ttcagagacc tcctcttgga cgacatccct gagaatcaat gttttagctg tcccatagtc 421 tgacgtctgt ttccgaccgc ttttgagctg gcgcaggctt agtcattaat ggccaggacg 481 atgttaaatg ttctgcctga ttggcttgca gctacacacc ttttgtcatt tgcagagcag 541 caactccctc ttgagctctt ggggagtctt tacacaaata cactagaaaa aaggcaccca 601 tccatttttt ttccatcttg gcattagctc acaggcatag tcctgggatg acctggagta 661 gaggcagtgg aggataaatt catcttgcac agacttgttt gtgctagttc tagcctgtct 721 ctcgccacag atctagcttt taaatactca agtgattggt tttgtgtagg aatgtgtgga 781 ttgttggatt ggaagaattt tctccctgga tttctagtgt ttacataagc agatacaaaa 841 aaaatttgat cactgattta aatagcaggg cttattttaa aaagttatgg gtgcttcaag 901 gtggtacaga ataaaaatgt cagggttttt tttttttttt ttttttaaca agtcgtaaca 961 caaccaaaat gtatatatta atgttttgtc aggaaagggt caaaatggaa aatttgcaac 1021 aaagacaaac tacaatagaa caagtgcaaa cagaagctga caaatatatg cccctcgttg 1081 ggagttcagc ccatggaatg ttatgtagga caaaaggaat ggaagagata tttcagtaac 1141 attttgttct ctgtcaaaaa ccttctgaaa tataaatctg ctgtgtattg gagaatggat 1201 acagcaattg attcaagttg aatagctttc atttaactag aatatcccac agaaagcagt 1261 tcttgttctg acaaccatat ttttgctttc tttcacttaa agaaaattga attcatgttt 1321 acatatctta tagggttgtt ttatggacaa agacacgggt caaaccccat cacagtggct 1381 agtgttacaa caaatagaaa catttctaaa tgaaataaca tttctaagcc agggccagtg 1441 cctgcagtaa taatactagg ttggtattat gaagccattt gcaactataa ataattcagt 1501 catagatgtg ctttttttaa aatcctggtt ttttaaaatt ctagtctttt gccaatacac 1561 acacccatac acatacttca cctatttgca taatagagga ggaatatgaa tatgtatata 1621 ataaagtcac tttattttgg acttgcaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa //