LOCUS BC010954 1207 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens chemokine (C-X-C motif) ligand 10, mRNA (cDNA clone MGC:13622 IMAGE:4274617), complete cds. ACCESSION BC010954 VERSION BC010954.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1207) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1207) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 19 Row: j Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4504700. FEATURES Location/Qualifiers source 1..1207 /db_xref="H-InvDB:HIT000035143" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:13622 IMAGE:4274617" /tissue_type="Prostate" /clone_lib="NIH_MGC_83" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1207 /gene="CXCL10" /gene_synonym="C7" /gene_synonym="crg-2" /gene_synonym="gIP-10" /gene_synonym="IFI10" /gene_synonym="IP-10" /gene_synonym="mob-1" /db_xref="GeneID:3627" /db_xref="HGNC:HGNC:10637" /db_xref="MIM:147310" CDS 71..367 /gene="CXCL10" /gene_synonym="C7" /gene_synonym="crg-2" /gene_synonym="gIP-10" /gene_synonym="IFI10" /gene_synonym="IP-10" /gene_synonym="mob-1" /codon_start=1 /product="chemokine (C-X-C motif) ligand 10" /protein_id="AAH10954.1" /db_xref="GeneID:3627" /db_xref="HGNC:HGNC:10637" /db_xref="MIM:147310" /translation="MNQTAILICCLIFLTLSGIQGVPLSRTVRCTCISISNQPVNPRS LEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPESKAIKNLLKAVSKERSKRSP" BASE COUNT 414 a 232 c 213 g 348 t ORIGIN 1 gggggagaca ttcctcaatt gcttagacat attctgagcc tacagcagag gaacctccag 61 tctcagcacc atgaatcaaa ctgccattct gatttgctgc cttatctttc tgactctaag 121 tggcattcaa ggagtacctc tctctagaac tgtacgctgt acctgcatca gcattagtaa 181 tcaacctgtt aatccaaggt ctttagaaaa acttgaaatt attcctgcaa gccaattttg 241 tccacgtgtt gagatcattg ctacaatgaa aaagaagggt gagaagagat gtctgaatcc 301 agaatcgaag gccatcaaga atttactgaa agcagttagc aaggaaaggt ctaaaagatc 361 tccttaaaac cagaggggag caaaatcgat gcagtgcttc caaggatgga ccacacagag 421 gctgcctctc ccatcacttc cctacatgga gtatatgtca agccataatt gttcttagtt 481 tgcagttaca ctaaaaggtg accaatgatg gtcaccaaat cagctgctac tactcctgta 541 ggaaggttaa tgttcatcat cctaagctat tcagtaataa ctctaccctg gcactataat 601 gtaagctcta ctgaggtgct atgttcttag tggatgttct gaccctgctt caaatatttc 661 cctcaccttt cccatcttcc aagggtacta aggaatcttt ctgctttggg gtttatcaga 721 attctcagaa tctcaaataa ctaaaaggta tgcaatcaaa tctgcttttt aaagaatgct 781 ctttacttca tggacttcca ctgccatcct cccaaggggc ccaaattctt tcagtggcta 841 cctacataca attccaaaca catacaggaa ggtagaaata tctgaaaatg tatgtgtaag 901 tattcttatt taatgaaaga ctgtacaaag tagaagtctt agatgtatat atttcctata 961 ttgttttcag tgtacatgga ataacatgta attaagtact atgtatcaat gagtaacagg 1021 aaaattttaa aaatacagat agatatatgc tctgcatgtt acataagata aatgtgctga 1081 atggttttca aaataaaaat gaggtactct cctggaaata ttaagaaaga ctatctaaat 1141 gttgaaagat caaaaggtta ataaagtaat tataactcaa aaaaaaaaaa aaaaaaaaaa 1201 aaaaaaa //