LOCUS BC010923 1326 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens ALX homeobox 1, mRNA (cDNA clone MGC:13497 IMAGE:4278460), complete cds. ACCESSION BC010923 VERSION BC010923.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1326) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1326) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 19 Row: k Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 5901917. FEATURES Location/Qualifiers source 1..1326 /db_xref="H-InvDB:HIT000035122" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:13497 IMAGE:4278460" /tissue_type="Brain, primitive neuroectodermal" /clone_lib="NIH_MGC_56" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1326 /gene="ALX1" /db_xref="GeneID:8092" /db_xref="HGNC:HGNC:1494" /db_xref="MIM:601527" CDS 11..991 /gene="ALX1" /codon_start=1 /product="ALX homeobox 1" /protein_id="AAH10923.1" /db_xref="GeneID:8092" /db_xref="HGNC:HGNC:1494" /db_xref="MIM:601527" /translation="MEFLSEKFALKSPPSKNSDFYMGAGGPLEHVMETLDNESFYSKA SAGKCVQAFGPLPRAEHHVRLERTSPCQDSSVNYGITKVEGQPLHTELNRAMDNCNSL RMSPVKGMQEKGELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVY VREQLALRTELTEARVQVWFQNRRAKWRKRERYGQIQQAKSHFAATYDISVLPRTDSY PQIQNNLWAGNASGGSVVTSCMLPRDTSSCMTPYSHSPRTDSSYTGFSNHQNQFSHVP LNNFFTDSLLTGATNGHAFETKPEFERRSSSIAVLRMKAKEHTANISWAM" BASE COUNT 417 a 284 c 299 g 326 t ORIGIN 1 ggggaggatt atggagtttc tgagcgagaa gtttgccctc aagagccctc cgagtaaaaa 61 cagtgacttt tacatgggcg caggaggtcc tctggagcac gttatggaga cgctggacaa 121 tgagtccttt tacagcaaag cgtctgcagg caaatgcgtg caggccttcg gacccctgcc 181 ccgcgccgag catcacgtgc gcttggagag gacctcgccc tgtcaggaca gcagcgtgaa 241 ctatgggatc actaaagtag aaggacagcc ccttcacacc gaactgaata gagctatgga 301 caactgtaac agtctccgaa tgtctcccgt gaaagggatg caagagaagg gagagctgga 361 tgaacttggg gataaatgtg atagcaatgt atccagcagt aagaaacgga ggcaccgaac 421 caccttcacc agtttgcagc tagaggagct ggagaaagtc tttcagaaaa ctcattaccc 481 ggatgtgtat gtcagagaac agcttgctct gaggacagag ctcactgagg ccagggtcca 541 ggtttggttt caaaatcgaa gggccaaatg gagaaaaagg gaacgttatg gccaaataca 601 acaagcgaaa agccattttg ctgccaccta tgatatatca gttttgccaa ggactgacag 661 ctacccacag attcagaaca atttgtgggc aggaaatgca agtggtggtt ctgtggttac 721 ttcatgcatg ttaccacgtg acacttcctc ctgtatgaca ccttattctc actcgcctcg 781 gacagattcc agttacacgg ggttttcaaa ccaccagaac cagttcagcc acgtgcccct 841 caacaatttt ttcactgact ctcttcttac tggggcaacc aatggacatg catttgaaac 901 aaagccagag tttgaaagga ggtcttccag tatcgcagtt cttcgaatga aagccaagga 961 gcacaccgcc aatatttcat gggccatgta acatacagta ctcttttatt tttcttttaa 1021 tagcaaagtt aaacattctt atttctcata tttaaaggat accacaataa gctgctgtgt 1081 gtggaattgc taaaggtcaa gatattcagt gagaccagct taaatgaata gttgttattt 1141 aacattaaaa tctaagaatg aacctctgaa aagactaaat aggtttacca tgtgccagtc 1201 tccacaaacc ctgttttagt agtaaggttt tctttttcta ttgtacaagt caatgaaata 1261 tgatcacgca acttattaaa gaataaatgt gttaaacaaa aaaaaaaaaa aaaaaaaaaa 1321 aaaaaa //