LOCUS BC010922 809 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens HERV-H LTR-associating 3, mRNA (cDNA clone MGC:13496 IMAGE:4064190), complete cds. ACCESSION BC010922 VERSION BC010922.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 809) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 809) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 19 Row: c Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 5901965. FEATURES Location/Qualifiers source 1..809 /db_xref="H-InvDB:HIT000035121" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:13496 IMAGE:4064190" /tissue_type="Bone marrow, chronic myelogenous leukemia" /clone_lib="NIH_MGC_54" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..809 /gene="HHLA3" /db_xref="GeneID:11147" /db_xref="HGNC:HGNC:4906" /db_xref="MIM:604372" CDS 121..486 /gene="HHLA3" /codon_start=1 /product="HERV-H LTR-associating 3" /protein_id="AAH10922.1" /db_xref="GeneID:11147" /db_xref="HGNC:HGNC:4906" /db_xref="MIM:604372" /translation="MFGACYKQPLKPSGSEPPAEECRMTPRHAGCDVTEMQRILSQPT FTEHLLRAVCLVNGKGSLSRPQESILGSLARKNLRRIHRVSLVMCVRPLSPSKAIISP VTCMYTSRWPEASEESQKK" BASE COUNT 221 a 235 c 169 g 184 t ORIGIN 1 gggggaggca gtgtgtttcc gcccagagct ggagtctccc agctgccagc cgaccccgaa 61 cccgcactcc cgccaaccgc gctttttgtg ggcggtcgga aaccacagcc tccgttggat 121 atgttcggtg catgttataa acaaccactt aaaccctccg gatctgagcc tcccgcagag 181 gaatgcagaa tgacgccacg gcacgcagga tgtgatgtca ccgagatgca gaggatactc 241 agtcaaccaa catttactga gcatctactt cgtgccgtat gtcttgtcaa cggaaagggg 301 tccctatcca gaccccaaga gagcattctt ggatctcttg caagaaagaa tttgaggcga 361 atccatagag taagcttagt gatgtgtgtc agacctctga gcccaagcaa agccatcata 421 tcccctgtga cctgcatgta tacatccaga tggcctgaag caagtgaaga atcacaaaag 481 aagtgaaaag ggccggttcc tgccttaact gatgacattc caccattgtg atttgttcct 541 gccccacctt aactgagcga ttaacctgtg aacttccttc tcctggctca gaagcttccc 601 cactgagcac cttgtgaccc ccgcccctgc ctgccataga acaaccccct ttgattgtaa 661 ttttccttta cctacccaaa tcctataaaa cggccccacc cctatctccc ttcgctgaca 721 ctctctttgg actcagcctg cctgcaccta ggtgattaaa aagctttatt gctcacgcat 781 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //