LOCUS       BC010849                2169 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens ceroid-lipofuscinosis, neuronal 6, late infantile,
            variant, mRNA (cDNA clone MGC:8851 IMAGE:3878776), complete cds.
ACCESSION   BC010849
VERSION     BC010849.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2169)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2169)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUL-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: DCTD/DTP/Gazdar
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 14 Row: c Column: 18
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 8923531.
FEATURES             Location/Qualifiers
     source          1..2169
                     /db_xref="H-InvDB:HIT000035069"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:8851 IMAGE:3878776"
                     /tissue_type="Lung, large cell carcinoma"
                     /clone_lib="NIH_MGC_68"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..2169
                     /gene="CLN6"
                     /gene_synonym="FLJ20561"
                     /gene_synonym="HsT18960"
                     /db_xref="GeneID:54982"
                     /db_xref="HGNC:HGNC:2077"
                     /db_xref="MIM:606725"
     CDS             73..1008
                     /gene="CLN6"
                     /gene_synonym="FLJ20561"
                     /gene_synonym="HsT18960"
                     /codon_start=1
                     /product="ceroid-lipofuscinosis, neuronal 6, late
                     infantile, variant"
                     /protein_id="AAH10849.1"
                     /db_xref="GeneID:54982"
                     /db_xref="HGNC:HGNC:2077"
                     /db_xref="MIM:606725"
                     /translation="MEATRRRQHLGATGGPGAQLGASFLQARHGSVSADEAARTAPFH
                     LDLWFYFTLQNWVLDFGRPIAMLVFPLEWFPLNKPSVGDYFHMAYNVITPFLLLKLIE
                     RSPRTLPRSITYVSIIIFIMGASIHLVGDSVNHRLLFSGYQHHLSVRENPIIKNLKPE
                     TLIDSFELLYYYDEYLGHCMWYIPFFLILFMYFSGCFTASKAESLIPGPALLLVAPSG
                     LYYWYLVTEGQIFILFIFTFFAMLALVLHQKRKRLFLDSNGLFLFSSFALTLLLVALW
                     VAWLWNDPVLRKKYPGVIYVPEPWAFYTLHVSSRH"
BASE COUNT          391 a          673 c          609 g          496 t
ORIGIN      
        1 ctccgccggg gcagccgagc tgaaccggtc tcttcctcgg aaaggcaggg ccgaggggcc
       61 tgcggggcag ccatggaggc gacgcggagg cggcagcacc tgggagcgac gggcggccca
      121 ggcgcgcagc tgggcgcctc cttcctgcag gccaggcatg gctctgtgag cgctgatgag
      181 gctgcccgca cggctccctt ccacctcgac ctctggttct acttcacact gcagaactgg
      241 gttctggact ttgggcgtcc cattgccatg ctggtattcc ctctcgagtg gtttccactc
      301 aacaagccca gtgttgggga ctacttccac atggcctaca acgtcatcac gccctttctc
      361 ttgctcaagc tcatcgagcg gtccccccgc accctgccac gctccatcac gtacgtgagc
      421 atcatcatct tcatcatggg tgccagcatc cacctggtgg gtgactctgt caaccaccgc
      481 ctgctcttca gtggctacca gcaccacctg tctgtccgtg agaaccccat catcaagaat
      541 ctcaagccgg agacgctgat cgactccttt gagctgctct actattatga tgagtacctg
      601 ggtcactgca tgtggtacat ccccttcttc ctcatcctct tcatgtactt cagcggctgc
      661 tttactgcct ctaaagctga gagcttgatt ccagggcctg ccctgctcct ggtggcaccc
      721 agtggcctgt actactggta cctggtcacc gagggccaga tcttcatcct cttcatcttc
      781 accttcttcg ccatgctggc cctcgtcctg caccagaagc gcaagcgcct cttcctggac
      841 agcaacggcc tcttcctctt ctcctccttc gcactgaccc tcttgcttgt ggcgctctgg
      901 gtcgcctggc tgtggaatga ccctgttctc aggaagaagt acccgggtgt catctacgtc
      961 cctgagccct gggctttcta cacccttcac gtcagcagtc ggcactgagt ccctggcacc
     1021 aggctctggc gctctgctgg gtgggagggt gggccatgga gggcatctga atacaggagt
     1081 agggggggtg tgggtgtgta accagagacc gagagcatga gtggggtgtg cctcgtgtgc
     1141 gtggattcgt gtgtgtgtgt gtgtcttgta tatgtgtgcg cagagtgcat cattttcaga
     1201 ctctactatt tccgtcaagt ttctgtttga tttggatcat ctcaggatcg gattctgttt
     1261 tagagtgttt ctgggccagg atccgggccc ctgccctcct ctgcacctga ccacactccc
     1321 tactcagggc tagtctgttc ttcccggaca tcttctggta gccgtgcagg agagggctgg
     1381 gtggggcaga ggccaggagg ggacctggtg tgtcacctgc ccaccacctg gctcatccct
     1441 caggcccacc ctgaccctac attacatagg ttacgtcagc ctactgtggc tgttgagcaa
     1501 agcatttctc ctttctgggc ctcatttgca ctagatgggc ctgtggtccc aaagtaggtc
     1561 agtaggttgg ggttgctgac accccttggg tgcagctttg ggacagatga gtggctctgt
     1621 cctgtcactg ccctctccct gcctgggggc tatgtgcact ccagacccct gcccaggctc
     1681 aggcccatga ggtatggaga caccctggcc cccaggagct ggaggcaccg cccactcccc
     1741 tggcattcca gctttgcagg tgaccctcct ctacccaaag ctctgtcccc ctgctcccac
     1801 tccagaagaa ctgcggcacg tgcttcgggc agcctagcca caggctttga gcgcctgcat
     1861 tcctgggggc tggagggtgg ggtgccaaag gccctgagca aaagccagag ctcctctcat
     1921 caaagccttt acaaggtgct gggcccagag gctttgcctt gacagagtgg cccagggttt
     1981 caagggagga ggaacctccc cctacctagg acccttcctg tggggggtct acagagtcag
     2041 ggacagaagg gaagggaccc acaggaagtc acagtggtgc ccagggatgt gtcagccccc
     2101 agccacgggg acgcgggatt caagaatgaa gtaaatacag tcacagcccc aaaaaaaaaa
     2161 aaaaaaaaa
//