LOCUS BC010737 1485 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens reticulon 4, mRNA (cDNA clone IMAGE:3901353), complete
cds.
ACCESSION BC010737
VERSION BC010737.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1485)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1485)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: n Column: 2
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1485
/db_xref="H-InvDB:HIT000035059"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3901353"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1485
/gene="RTN4"
/gene_synonym="ASY"
/gene_synonym="Nbla00271"
/gene_synonym="Nbla10545"
/gene_synonym="NI220/250"
/gene_synonym="NOGO"
/gene_synonym="NOGO-A"
/gene_synonym="NSP"
/gene_synonym="NSP-CL"
/gene_synonym="RTN-X"
/gene_synonym="RTN4-A"
/gene_synonym="RTN4-B1"
/gene_synonym="RTN4-B2"
/gene_synonym="RTN4-C"
/db_xref="GeneID:57142"
/db_xref="HGNC:HGNC:14085"
/db_xref="MIM:604475"
CDS 6..1127
/gene="RTN4"
/gene_synonym="ASY"
/gene_synonym="Nbla00271"
/gene_synonym="Nbla10545"
/gene_synonym="NI220/250"
/gene_synonym="NOGO"
/gene_synonym="NOGO-A"
/gene_synonym="NSP"
/gene_synonym="NSP-CL"
/gene_synonym="RTN-X"
/gene_synonym="RTN4-A"
/gene_synonym="RTN4-B1"
/gene_synonym="RTN4-B2"
/gene_synonym="RTN4-C"
/codon_start=1
/product="reticulon 4"
/protein_id="AAH10737.1"
/db_xref="GeneID:57142"
/db_xref="HGNC:HGNC:14085"
/db_xref="MIM:604475"
/translation="MEDLDQSPLVSSSDSPPRPQPAFKYQFVREPEDEEEEEEEEEED
EDEDLEELEVLERKPAAGLSAAPVPTAPAAGAPLMDFGNDFVPPAPRGPLPAAPPVAP
ERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEPVWT
PPAPAPAAPPSTPAAPKRRGSSGSVVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIV
SVTAYIALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSA
LGHVNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPV
IYERHQAQIDHYLGLANKNVKDAMAKIQAKIPGLKRKAE"
BASE COUNT 333 a 398 c 396 g 358 t
ORIGIN
1 cagccatgga agacctggac cagtctcctc tggtctcgtc ctcggacagc ccaccccggc
61 cgcagcccgc gttcaagtac cagttcgtga gggagcccga ggacgaggag gaagaagagg
121 aggaggaaga ggaggacgag gacgaagacc tggaggagct ggaggtgctg gagaggaagc
181 ccgccgccgg gctgtccgcg gccccagtgc ccaccgcccc tgccgccggc gcgcccctga
241 tggacttcgg aaatgacttc gtgccgccgg cgccccgggg acccctgccg gccgctcccc
301 ccgtcgcccc ggagcggcag ccgtcttggg acccgagccc ggtgtcgtcg accgtgcccg
361 cgccatcccc gctgtctgct gccgcagtct cgccctccaa gctccctgag gacgacgagc
421 ctccggcccg gcctccccct cctcccccgg ccagcgtgag cccccaggca gagcccgtgt
481 ggaccccgcc agccccggct cccgccgcgc ccccctccac cccggccgcg cccaagcgca
541 ggggctcctc gggctcagtg gttgttgacc tcctgtactg gagagacatt aagaagactg
601 gagtggtgtt tggtgccagc ctattcctgc tgctttcatt gacagtattc agcattgtga
661 gcgtaacagc ctacattgcc ttggccctgc tctctgtgac catcagcttt aggatataca
721 agggtgtgat ccaagctatc cagaaatcag atgaaggcca cccattcagg gcatatctgg
781 aatctgaagt tgctatatct gaggagttgg ttcagaagta cagtaattct gctcttggtc
841 atgtgaactg cacgataaag gaactcaggc gcctcttctt agttgatgat ttagttgatt
901 ctctgaagtt tgcagtgttg atgtgggtat ttacctatgt tggtgccttg tttaatggtc
961 tgacactact gattttggct ctcatttcac tcttcagtgt tcctgttatt tatgaacggc
1021 atcaggcaca gatagatcat tatctaggac ttgcaaataa gaatgttaaa gatgctatgg
1081 ctaaaatcca agcaaaaatc cctggattga agcgcaaagc tgaatgaaaa cgcccaaaat
1141 aattagtagg agttcatctt taaaggggat attcatttga ttatacgggg gagggtcagg
1201 gaagaacgaa ccttgacgtt gcagtgcagt ttcacagatc gttgttagat ctttattttt
1261 agccatgcac tgttgtgagg aaaaattacc tgtcttgact gccatgtgtt catcatctta
1321 agtattgtaa gctgctatgt atggatttaa accgtaatca tatctttttc ctatctatct
1381 gaggcactgg tggaataaaa aacctgtata ttttactttg ttgcagatag tcttgccgca
1441 tcttggcaag ttgcagagat ggtggagcta gaaaaaaaaa aaaaa
//