LOCUS BC010708 2169 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens atlastin GTPase 1, mRNA (cDNA clone MGC:9903 IMAGE:3869877), complete cds. ACCESSION BC010708 VERSION BC010708.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2169) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2169) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC010708.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 13 Row: j Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19923444. FEATURES Location/Qualifiers source 1..2169 /db_xref="H-InvDB:HIT000035055" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9903 IMAGE:3869877" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2169 /gene="ATL1" /gene_synonym="AD-FSP" /gene_synonym="atlastin1" /gene_synonym="FSP1" /gene_synonym="GBP3" /db_xref="GeneID:51062" /db_xref="HGNC:HGNC:11231" /db_xref="MIM:606439" CDS 145..1821 /gene="ATL1" /gene_synonym="AD-FSP" /gene_synonym="atlastin1" /gene_synonym="FSP1" /gene_synonym="GBP3" /codon_start=1 /product="atlastin GTPase 1" /protein_id="AAH10708.2" /db_xref="GeneID:51062" /db_xref="HGNC:HGNC:11231" /db_xref="MIM:606439" /translation="MAKNRRDRNSWGGFSEKTYEWSSEEEEPVKKAGPVQVLIVKDEH SFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDWVGD YNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKKVAVLLMDTQGTFDSQSTLRDS ATVFALSTMISSIQVYNLSQNVQEDDLQHLQLCTEYGRLAMEETFLKPFQSLIFLVRD WSFPYEFSYGADGGAKFLEKRLKVSGNQHEELQNVRKHIHSCFTNISCFLLPHPGLKV ATNPNFDGKLKEIDDEFIKNLKILIPWLLSPESLDIKEINGNKITCRGLVEYFKAYIK IYQGEELPHPKSMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTKHL QLKEESVKLFRGVKKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKNIFHAARTPAT LFVVIFITYVIAGVTGFIGLDIIASLCNMIMGLTLITLCTWAYIRYSGEYRELGAVID QVAAALWDQGSTNEALYKLYSAAATHRHLYHQAFPTPKSESTEQSEKKKM" BASE COUNT 690 a 449 c 476 g 554 t ORIGIN 1 accagcgcca cagcaacatc ctcagagtct gagcgaactg cgcccagcgc gggcacggag 61 cctcccaccg ccagcaacct gcggccccgg agaaggcagc gagcgcagtg acagcgcctc 121 accgccacca gctcctggac caccatggcc aagaaccgca gggacagaaa cagttggggt 181 ggattttcgg aaaagacata tgaatggagc tcagaagagg aggagccagt gaaaaaggca 241 ggaccagtcc aagtcctcat tgtcaaagat gagcattcct ttgagttaga tgaaactgca 301 ttaaatcgga tccttctctc ggaggctgtc agagacaagg aggttgttgc tgtatctgtt 361 gctggagcat ttagaaaagg aaaatcattc ctgatggact tcatgttgag atacatgtac 421 aaccaggaat cagttgattg ggttggagac tacaatgaac cattgactgg tttttcatgg 481 agaggtggat ctgaacgaga gaccacagga attcagatat ggagtgaaat cttccttatc 541 aataaacctg atggtaaaaa ggttgcagtg ttattgatgg atactcaggg aacctttgat 601 agtcagtcaa ctttgagaga ttcagccaca gtatttgccc ttagcacaat gatcagctca 661 atacaggtat ataacttatc ccaaaatgtc caggaggatg atcttcagca cctccagctt 721 tgcactgagt atggcagact ggcaatggag gaaacattcc tgaagccatt tcagagtctg 781 atatttcttg ttcgagactg gagtttccca tacgaatttt catatggagc cgatggtggt 841 gccaaattct tggaaaaacg cctcaaggtc tcagggaacc agcatgaaga actacagaac 901 gtcagaaaac acatccattc ctgtttcacc aacatttcct gttttctgct acctcatcct 961 ggcttaaaag tagctaccaa tccaaacttt gatggaaaat tgaaagaaat agatgatgaa 1021 ttcatcaaaa acttgaaaat actgattcct tggctactta gtcccgagag cctagatatt 1081 aaagagatca atgggaataa aatcacctgc cggggtctgg tggagtactt caaggcttat 1141 ataaagatct atcaaggtga agaattacca catcccaaat ccatgttaca ggccacagca 1201 gaagctaaca atttagcagc cgtggcaact gccaaggaca catacaacaa aaaaatggaa 1261 gagatttgtg gtggtgacaa accatttctg gccccaaatg acttgcagac caaacacctg 1321 caacttaagg aagaatctgt gaagctattc cgaggggtga agaagatggg tggggaagaa 1381 tttagccggc gttacctgca gcagttggag agtgaaatag atgaacttta catccaatat 1441 atcaagcaca atgatagcaa aaatatcttc catgcagctc gtaccccagc cacactgttt 1501 gtagtcatct ttatcacata tgtgattgct ggtgtgactg gattcattgg tttggacatc 1561 atagctagcc tatgcaatat gataatggga ctgaccctta tcaccctgtg cacttgggca 1621 tatatccggt actctggaga ataccgagag ctgggagctg taatagacca ggtggctgca 1681 gctctgtggg accagggaag tacaaatgag gctttgtaca agctttacag tgcagcagca 1741 acccacagac atctgtatca tcaagctttc cctacaccaa agtcggaatc tactgaacaa 1801 tcagaaaaga aaaaaatgta atgcaaattt taagaaatac aggtgcatga ccaattgtca 1861 attaaatatt cagttttatg tctccatgca aacattcaaa gtgcttccat cagaacggag 1921 taaaatacta aacacctctg aagactgcaa actggattag ttcttttact tcagtgttta 1981 ataagcagat gtatgtatgc atggttatac tattttgtta acatgtacaa tttcctgatt 2041 tttcttcaaa aatgctgtta taaagtattt gtctatttat gataacagta cacgtgttct 2101 gcttgaattt actaaattct actactgggt tataattaaa tcatgtgata ttccaaaaaa 2161 aaaaaaaaa //