LOCUS BC010697 1877 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RNA-binding region (RNP1, RRM) containing 3, mRNA
(cDNA clone MGC:9935 IMAGE:3873751), complete cds.
ACCESSION BC010697
VERSION BC010697.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1877)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1877)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: n Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56550119.
FEATURES Location/Qualifiers
source 1..1877
/db_xref="H-InvDB:HIT000035050"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9935 IMAGE:3873751"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1877
/gene="RNPC3"
/gene_synonym="RBM40"
/gene_synonym="RNP"
/db_xref="GeneID:55599"
/db_xref="HGNC:HGNC:18666"
CDS 92..1645
/gene="RNPC3"
/gene_synonym="RBM40"
/gene_synonym="RNP"
/codon_start=1
/product="RNA-binding region (RNP1, RRM) containing 3"
/protein_id="AAH10697.2"
/db_xref="GeneID:55599"
/db_xref="HGNC:HGNC:18666"
/translation="MAAPEQPLAISRGCTSSSSLSPPRGDRTLLVRHLPAELTAEEKE
DLLKYFGAQSVRVLSDKGRLKHTAFATFPNEKAAIKALTRLHQLKLLGHTLVVEFAKE
QDRVHSPCPTSGSEKKKRSDDPVEDDKEKKELGYLTVENGIAPNHGLTFPLNSCLKYM
YPPPSSTILANIVNALASVPKFYVQVLHLMNKMNLPTPFGPITARPPMYEDYMPLHAP
LPPTSPQPPEEPPLPDEDEELSSEESEYESTDDEDRQRMNKLMELANLQPKRPKTIKQ
RHVRKKRKIKDMLNTPLCPSHSSLHPVLLPSDVFDQPQPVGNKRIEFHISTDMPAAFK
KDLEKEQNCEEKNHDLPATEVDASNIGFGKIFPKPNLDITEEIKEDSDEMPSECISRR
ELEKGRISREEMETLSVFRSYEPGEPNCRIYVKNLAKHVQEKDLKYIFGRYVDFSSET
QRIMFDIRLMKEGRMKGQAFIGLPNEKAAAKALKEANGYVLFGKPMVVQFARSARPKQ
DPKEGKRKC"
BASE COUNT 639 a 371 c 370 g 497 t
ORIGIN
1 gcggaaaaaa tatttctccc agcttgtgtt gatgccgcga ttttgactga gacttcttcc
61 cacgatttct gtttttgctt ctccaaggaa aatggcagct cccgagcagc cgcttgcgat
121 atcaagggga tgcacgagct cctcctcgct ttccccgcct cggggcgacc gaacccttct
181 ggtcaggcac ctgccggctg agcttactgc tgaggagaaa gaggacttgc tgaagtactt
241 cggggctcag tctgtgcggg tcctgtcaga taaggggcga ctgaaacata cagcttttgc
301 cacattccct aatgaaaaag cagctataaa ggcattgaca agactccatc aactgaaact
361 tttaggtcat actttagtcg ttgaatttgc aaaagagcaa gatcgagttc actccccatg
421 tcccacttca ggctctgaaa aaaaaaaaag gtctgatgac cctgtcgaag atgataaaga
481 aaaaaaagaa cttggttatt taacagtaga aaatggaatt gcaccaaacc atgggctgac
541 ttttccttta aattcatgcc tcaagtatat gtacccacca ccttccagca caatcctagc
601 aaacattgta aatgccttgg caagcgtgcc taagttctat gtacaggtcc ttcatcttat
661 gaataaaatg aatttgccca caccttttgg accaattact gcgcgacctc ccatgtatga
721 agactatatg ccattgcatg cacctcttcc acccacatct cctcagccac ctgaggaacc
781 tcctttgcca gacgaggatg aggaattatc tagtgaagaa tcagaatatg aaagcactga
841 tgatgaggac cgacagagaa tgaacaaatt aatggaacta gcaaatcttc agcccaaaag
901 acctaaaaca ataaagcagc gccatgtgag aaaaaagaga aaaataaagg atatgttgaa
961 tacacctttg tgtccttcac acagcagttt acatccagtg ctgttacctt cagatgtatt
1021 tgaccaacca caacctgtag gtaacaaaag aattgaattc catatatcta ccgacatgcc
1081 agctgcattt aagaaagatt tagaaaagga acaaaattgt gaggaaaaaa atcatgattt
1141 acctgctact gaagttgatg catccaatat aggatttgga aaaatcttcc ccaaacctaa
1201 tttggacatc acagaggaga ttaaagaaga ctctgatgaa atgccttcag aatgtatttc
1261 tagaagggaa ttggaaaagg gcagaatttc tagagaagaa atggaaacac tttcagtttt
1321 cagaagttat gaaccgggtg aaccaaactg tagaatttat gtaaagaatt tagctaaaca
1381 tgttcaagaa aaggacctta aatatatttt tggaagatat gttgactttt catcagaaac
1441 acagcggatc atgtttgata tacgtttgat gaaagaaggt cgtatgaaag gacaagcttt
1501 cattggactt cctaatgaaa aagcagcagc aaaagcctta aaggaagcta atggatatgt
1561 gctttttgga aaacccatgg tggttcagtt tgctcgatct gctagaccaa aacaagatcc
1621 taaggaagga aaaagaaagt gttaaaaatt aataaaggtt tttttgaatc ccgtgtcctt
1681 caagtgcttt ctaactttga gaggaagaaa ttgaccacct ggactatgga actgtgcgta
1741 acagctttga aagtgtattt aaaaattaaa tctatatgcc tttaaatcag tgaattggaa
1801 acatattaca tgtattttaa tgattttcct caaatataat aaattgtttc ctttccaata
1861 aaaaaaaaaa aaaaaaa
//