LOCUS BC010686 2796 bp mRNA linear HUM 26-APR-2004
DEFINITION Homo sapiens ATPase family, AAA domain containing 2, mRNA (cDNA
clone IMAGE:3874239), partial cds.
ACCESSION BC010686
VERSION BC010686.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2796)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2796)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: n Column: 2.
FEATURES Location/Qualifiers
source 1..2796
/db_xref="H-InvDB:HIT000258941"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3874239"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2796
/gene="ATAD2"
/gene_synonym="DKFZp667N1320"
/gene_synonym="MGC29843"
/gene_synonym="MGC5254"
/gene_synonym="PRO2000"
/db_xref="GeneID:29028"
CDS <1..2149
/gene="ATAD2"
/gene_synonym="DKFZp667N1320"
/gene_synonym="MGC29843"
/gene_synonym="MGC5254"
/gene_synonym="PRO2000"
/codon_start=2
/product="ATAD2 protein"
/protein_id="AAH10686.1"
/db_xref="GeneID:29028"
/translation="GRVGEVAMQKMIPASQRAVTSPGQALSTVVKPLLQNTVDKILEA
LQRVFPHAEFRTNKTLDSDISCPLLESDLAYSDDDVPSVYENGLSQKSSHKAKDNFNF
LHLNRNACYQPMSFRPRILIVGEPGFGQGSHLAPAVIHALEKFTVYTLDIPVLFGVST
TSPEETCAQVIREAKRTAPSIVYVPHIHVWWEIVGPTLKATFTTLLQNIPSFAPVLLL
ATSDKPHSALPEEVQELFIRDYGEIFNVQLPDKEERTKFFEDLILKQAAKPPISKKKA
VLQALEVLPVAPPPEPRSLTAEEVKRLEEQEEDTFRELRIFLRNVTHRLAIDKRFRVF
TKPVDPDEVPDYVTVIKQPMDLSSVISKIDLHKYLTVKDYLRDIDLICSNALEYNPDR
DPGDRLIRHRACALRDTAYAIIKEELDEDFEQLCEEIQESRKKRGCSSSKYAPSYYHV
MPKQNSTLVGDKRSDPEQNEKLKTPSTPVACSTPAQLKRKIRKKSNWYLGTIKKRRKI
SQAKDDSQNAIDHKIESDTEETQDTSVDHNETGNTGESSVEENEKQQNASESKLELRN
NSNTCNIENELEDSRKTTACTELRDKIACNGDASSSQIIHISDENEGKEMCVLRMTRA
RRSQVEQQQLITVEKALAILSQPTPSLVVDHERLKNLLKTVVKKSQNYNIFQLENLYA
VISQCIYRHRKDHDKTSLIQKMEQEVENFSCSR"
misc_feature 359..826
/gene="ATAD2"
/gene_synonym="DKFZp667N1320"
/gene_synonym="MGC29843"
/gene_synonym="MGC5254"
/gene_synonym="PRO2000"
/note="AAA; Region: ATPase family associated with various
cellular activities (AAA). AAA family proteins often
perform chaperone-like functions that assist in the
assembly, operation, or disassembly of protein complexes"
/db_xref="CDD:pfam00004"
misc_feature 920..1258
/gene="ATAD2"
/gene_synonym="DKFZp667N1320"
/gene_synonym="MGC29843"
/gene_synonym="MGC5254"
/gene_synonym="PRO2000"
/note="BROMO; Region: bromo domain"
/db_xref="CDD:smart00297"
BASE COUNT 940 a 506 c 540 g 810 t
ORIGIN
1 cggacgcgtg ggcgaggtag ctatgcaaaa gatgatacca gcctcccaaa gagctgtgac
61 atcacctggg caggcactgt ccaccgttgt gaaaccactc ctgcaaaaca ctgttgacaa
121 gattttagaa gccctgcaga gagtatttcc acatgcagaa ttcagaacaa ataaaacatt
181 agactcagat atttcttgtc ctctgctaga aagtgacttg gcttacagtg atgatgatgt
241 tccatcagtt tatgaaaatg gactttctca gaaatcttct cataaggcaa aagacaattt
301 taattttctt catttgaata gaaatgcttg ttaccaacct atgtcttttc gaccaagaat
361 attgatagta ggagaaccag gatttgggca aggttctcac ttggcaccag ctgtcattca
421 tgctttggaa aagtttactg tatatacatt agacattcct gttctttttg gagttagtac
481 tacatcccct gaagaaacat gtgcccaggt gattcgtgaa gctaagagaa cagcaccaag
541 tatagtgtat gttcctcata tccacgtgtg gtgggaaata gttggaccga cacttaaagc
601 cacatttacc acattattac agaatattcc ttcatttgct ccagttttac tacttgcaac
661 ttctgacaaa ccccattccg ctttgccaga agaggtgcaa gaattgttta tccgtgatta
721 tggagagatt tttaatgtcc agttaccgga taaagaagaa cggacaaaat tttttgaaga
781 tttaattcta aaacaagctg ctaagcctcc tatatcaaaa aagaaagcag ttttgcaggc
841 tttggaggta ctcccagtag caccaccacc tgagccaaga tcactgacag cagaagaagt
901 gaaacgacta gaagaacaag aagaagatac atttagagaa ctgaggattt tcttaagaaa
961 tgttacacat aggcttgcta ttgacaagcg attccgagtg tttactaagc ctgttgaccc
1021 tgatgaggtt cctgattatg tcactgtaat aaagcaacca atggaccttt catctgtaat
1081 cagtaaaatt gatctacaca agtatctgac tgtgaaagac tatttgagag atattgatct
1141 aatctgtagt aatgccttag aatacaatcc agatagagat cctggagatc gtcttattag
1201 gcatagagcc tgtgctttaa gagatactgc ctatgccata attaaagaag aacttgatga
1261 agactttgag cagctctgtg aagaaattca ggaatctaga aagaaaagag gttgtagctc
1321 ctccaaatat gccccgtctt actaccatgt gatgccaaag caaaattcca ctcttgttgg
1381 tgataaaaga tcagacccag agcagaatga aaagctaaag acaccgagta ctcctgtggc
1441 ttgcagcact cctgctcagt tgaagaggaa aattcgcaaa aagtcaaact ggtacttagg
1501 caccataaaa aagcgaagga agatttcaca ggcaaaggat gatagccaga atgccataga
1561 tcacaaaatt gagagtgata cagaggaaac tcaagacaca agtgtagatc ataatgagac
1621 cggaaacaca ggagagtctt cggtggaaga aaatgaaaaa cagcaaaatg cctctgaaag
1681 caaactggaa ttgagaaata attcaaatac ttgtaatata gagaatgagc ttgaagactc
1741 taggaagact acagcatgta cagaattgag agacaagatt gcttgtaatg gagatgcttc
1801 tagctctcag ataatacata tttctgatga aaatgaagga aaagaaatgt gtgttctgcg
1861 aatgactcga gctagacgtt cccaggtaga acagcagcag ctcatcactg ttgaaaaggc
1921 tttggcaatt ctttctcagc ctacaccctc acttgttgtg gatcatgagc gattaaaaaa
1981 tcttttgaag actgttgtta aaaaaagtca aaactacaac atatttcagt tggaaaattt
2041 gtatgcagta atcagccaat gtatttatcg gcatcgcaag gaccatgata aaacatcact
2101 tattcagaaa atggagcaag aggtagaaaa cttcagttgt tccagatgat gatgtcatgg
2161 tatcgagtat tctttatatt cagttcctat ttaagtcatt tttgtcatgt ccgcctaatt
2221 gatgtagtat gaaaccctgc atctttaagg aaaagattaa aatagtaaaa taaaagtatt
2281 taaactttcc tgatatttat gtacatatta agataaatgt catgtgtaag ataactgata
2341 aatattggaa ctttgctaga acaagaccct gtagtaatag taataatagt tgaagtttgg
2401 ccaactctta ataaagttat tttggtaact aatgttttat ggcacttaag aataattagc
2461 agcgttaaat tttgtttgta ttaagcactt ttaattttat ccttcctaaa aatagtttat
2521 tgtatctgac aagaaactta cttaaccatt gtgtccttcc catctttttt gtcatctttg
2581 ttttcttcaa atgccctcct cccatctgcc ttgagattcc cttgtcttca cttaaaagcc
2641 agagtgcaag tcatgatttg cgggagggct cttgaaccac ttctggctgc accacaattc
2701 tgtacttgag tatcacagtc attgtttttg agacaaacat ttttataatt ctaatttggg
2761 ttaataaaga ttttaaatat taaaaaaaaa aaaaaa
//