LOCUS BC010680 3515 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens astrotactin 2, mRNA (cDNA clone IMAGE:3872170), with
apparent retained intron.
ACCESSION BC010680
VERSION BC010680.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3515)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3515)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC010680.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: l Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38016948
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3515
/db_xref="H-InvDB:HIT000035044"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3872170"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 826 a 609 c 724 g 1356 t
ORIGIN
1 ctggccccaa gcgcgcgggg caaggcggcc ctgcaggggt gagctttcct ctgagaaccc
61 ggggccttag cgacacgtaa tccagttttc cgtctccttg gtgcagatga agaaaccgac
121 gcccatgggc gaaagggacc tgctcaagtt cactcaagac cacagagctg ggcagcaaga
181 aggagctcaa gtccatgccc ttcatcacct acctctcagg tttgctgaca gcccagatgc
241 tgtcagatga ccagctcatt tcaggtgtgg agattcgctg tgaggagaag gggcgctgtc
301 catctacctg tcacctttgc cgccggccag gcaaggagca gctgagcccc acaccagtgc
361 tgctggataa caaccgtgtg gtgccacttt ataccctcat ccaagacaat ggcacaaagg
421 aggccttcaa gagtgcactg atgagttcct actggtgctc agggaaaggg gatgtgatcg
481 atgactggtg caggtgtgac ctcagcgcct ttgatgccaa tgggctcccc aactgcagcc
541 cccttctgca gccggtgctg cggctgtccc caacagtgga gccctccagt actgtggtct
601 ccttggagtg ggtggatgtt cagccagcta ttgggaccaa ggtctccgac tatattctgc
661 agcataagaa agtggatgaa tacacagaca ctgacctgta cacagtttat tgctggatta
721 catttattga tttgcggata ttgaaccagc cttgcatccc agggatgaag ccaacttgat
781 tgtggtggat aagctttttg atgtgctgct ggatttggtt tgccaatatt ttattgaaga
841 tttttgcatc gatgttcatc agggatattg gtctaaaatt ctcttttttt gttgtgtctc
901 tgccaggctt tggtatcagg atgatgttgg cctcataaaa tgaattaggg aggattccct
961 ctttttctat tgatttgaat agtttcagaa ggaatggtac cagctcatct ttgtacctct
1021 ggtagaattc ggctgtgaat ccatctggtc ctggacttat tttggttagt aggctattaa
1081 ttatggcctc aatttcagaa cctgttattg gtctattcag ggattcaact tcttcctggt
1141 ttagtcttgg gaggaggctg tatgtgtcca ggaatttatc catttcttct agattttcta
1201 gtttatttgc atagaggtgt ttatagtatt ctctaatggt agtttgtatt tctgtgggat
1261 cggtggtgat atccccttta tcatttttta ttgcgtctat ttgattcttc tctcttttat
1321 tctttatgag tcttgctagt agtctatcaa ttttgttgat tttttcaaaa aaccagctcc
1381 tggattcatt gattttttga agggtttttt ttttttttgt ctctatctcc ttcagttctg
1441 ctctcatctt agttatttct tgccttctgc tagcttttgt gtgtttgctc ttgcttctct
1501 agttctttta attatgatgt tagggtgtca gtttcagatc tttcttgctt tctcctgtgg
1561 gcatttagtg ctataaatct ccctctacac actgctttaa atgtgtccca gagattctgg
1621 tatgttgtgt cctgttctca ttggtttcaa agaacatctt tatttccgct ttcatttcgt
1681 tatgtaccca gtagtcattc aggagcaggt tgttcagttt ccatgtagtt gagcggtttt
1741 gagtgagttt cttaatcctg agttctagtt tgattgcact gtgttctgag agacagtttg
1801 ttataatttc tttcttttac atttgctgag gagtgcttta cttcccactg tgtgatcaat
1861 tttggaataa ctgcgatgtg gtgctgagaa gaatgtatat tctgttgatt ggggtggata
1921 gttctgtaga tgtctattag gtccgcttgg tgcagagctg agttcaattc ctggatatcc
1981 ttgttaactt tctgtctcat tgatctatct aatgttgaca gtggggtgtt aaagtctccc
2041 attattattg tgtgggagtc taagtctctt tgtaagtctc taaggacttg ctttatgaat
2101 ctgggtgctc ctatattggg tgcatatata tttaggatag ttagctcgaa gaaggtatct
2161 tctatttcta gtctgctgca aaggctctgt tttgtttcca ttggaaacag atgttgaatt
2221 ttctgtgtct attaaaatga ttgtatagtt tatctctcta aatttgttaa tatgataagt
2281 cacattgata gattttcata ttataaaaca acctactatg tgagatttat cccaggaatg
2341 tgtaggttgt tttatctgtt tgttttaatt aggatcattc tggtctcaca aaatgaatta
2401 taaaatattt tctccttttc agttttctga agtgtatctg tcttctcaga gaatcactgt
2461 ggttaaaatt gatagtattt ttttcttaat cattttttag aattcaccag tgaaggcatc
2521 tgggcttaga ccttttcttg caagaaggtt tttaactact aatttagtta tttaatagat
2581 atagatttac ttagattatc tgtttcttct tgagtgatct ttggcagctt gtgtgtttta
2641 aggaacttgt tcattccatg taaattatca aatttattgg aaaaagttgt ttatgacatt
2701 ccgttactat tcttttgaaa tctgttgaga ttatagtgat attagtctca tcttgatatt
2761 ggtaatgtgt gtctcctctg ttttttttct agatcagttt ggctagatag ctatgacatt
2821 tatttgtatt ttcaaagaat caactttcgg ttttatctgt ttttgcttat tgtttcctat
2881 ttcattgatt tatcctctaa tttttattat aattttcttt gtttggctta ctttgagttt
2941 ggttttctcc gcattttaat ttttgaaatg gtagctgagg ctattgattt gagacctttc
3001 ttgtaatgta gtcattccct cttaactact gctttagtag tatctcaaag attgtgttat
3061 gttgcgtttt cattttcatt cagttcaaag tatttccaat ttcacttttg ttttcttctt
3121 tgacttatga gttatttaga ggcatgccac ttcgttttca aatatttggg agtttttttc
3181 agaaattttt gttgttgatt tttgattccg ctatagtcag aaaatatgtt tttatgactt
3241 taaacatttt aaatttattg agactagttt ttggtctaga tggtctattg ctgtattcag
3301 tgttcacttt aaaataatgt gtatccactt atttatgggt attttataaa tgcctgttag
3361 ataaaatcgg ttaattatgt tattcaagtc ttctggagcc tttctgattt tctgtctatc
3421 aatatttgag agaggggtat taaaacctct gattatggac ttaaaaaaaa aaaaaaaaaa
3481 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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