LOCUS BC010679 2059 bp mRNA linear HTC 11-SEP-2007
DEFINITION Homo sapiens teashirt zinc finger homeobox 1, mRNA (cDNA clone
IMAGE:3869937), with apparent retained intron.
ACCESSION BC010679
VERSION BC010679.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2059)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2059)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC010679.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: j Column: 19
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2059
/db_xref="H-InvDB:HIT000087534"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3869937"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 539 a 581 c 523 g 416 t
ORIGIN
1 ctggacgaca gccccaaggg agggctggac attctcaagt ccctggagaa taccgtctcc
61 acggccatta gcaaagctca gaatggtgcg ccctcatggg gtggctaccc cagcatccat
121 gcagcctacc agctcccggg caccgtgaag ccactgccgg cggccgtgca gagcgtgcag
181 gtgcagccgt cctatgctgg cggcgtgaag tcgctgtctt ccgccgagca caacgccctc
241 ctgcactccc cagggagcct cacgccccca ccgcacaaga gcaacgtgtc tgccatggag
301 gagctggtgg agaaggtcac gggcaaggtc aacatcaaga aggaggagag accccctgag
361 aaggagaaga gctccccggc caaggctgcg tcccccatag caaaagagaa taaagatttc
421 ccgaaaacgg aggaagtcag cggcaaacca cagaagaagg gccctgaggc cgagactggg
481 aaggccaaaa aggagggacc gctggacgtt cacaccccaa atggcacaga gcctctcaaa
541 gcaaaggtca ccaacggctg taacaacctg gggatcatca tggaccactc accggagcct
601 tccttcatca acccgctgag cgctttgcag tccatcatga acacccacct gggcaaggtg
661 tccaagcccg tgagtccctc gctggacccg ctggcgatgc tgtacaagat cagcaacagc
721 atgctggaca agccggtgta ccccgccacc cctgtgaagc aggccgatgc catcgaccgc
781 tactattatg aaaacagcga ccagcccatt gacttaacca agtccaagaa caagccgctg
841 gtgtccagcg tggctgattc ggtggcatca cctctgcggg agagcgcact catggacatc
901 tccgacatgg tgaaaaacct cacaggccgc ctgacgccca agtcctccac gccctccaca
961 gtttcagaga agtccgatgc tgatggcagc agctttgagg aggcgttgga cgagctgtca
1021 ccggtccaca agaggaaggg ccggcagtcc aactggaacc cgcagcacct tctcatcctg
1081 caggcccagt tcgcctcgag cttgcgggag accacagagg gcaagtacat catgtcggac
1141 ttgggcccgc aggagagggt gcacatctcg aagtttactg ggctctccat gaccaccatc
1201 agccactggc tggccaatgt gaagtaccag ttgaggagga cagggggaac gaaattccta
1261 aagaacctgg acacagggca tcctgttttc ttttgcaacg attgtgcctc tcagttcaga
1321 actgcttcta catacataag tcatttggag acacacttgg gcttcagcct gaaggatctc
1381 tccaagctgc cactcaatca gattcaagaa cagcagaatg tttcgaaagt cctcaccaac
1441 aaaactctgg gcccactggg ggccaccgag gaagacttgg gctccacatt ccaatgtaag
1501 ctctgcaacc ggacttttgc gagcaagcac gcagtcaaac tgcaccttag taagacccac
1561 ggcaagtctc ccgaggacca cctgatctat gtgactgagt tggagaaaca gtagcgtcca
1621 ggtatgcaag agaccgcgga acattgcact aaacgtcgtc gagctgcact aggcctggcc
1681 tgagcctctg aaatcagtct ttcctttgtt gctggcccgc ctctctggac cttggttttc
1741 ttacacatat tttgtatatt tatatgctct ctgtccgatc tgtgcatgtt atttttcttt
1801 ttccgtgagt caaagtctga cctttatttt caacatctgt tcttggtgtt aagctatctt
1861 ttgtaggaaa tagtggggca cactactcag agacattatt tagcagtaaa gaaagacaca
1921 aataacaatg ataaaaagac atcctaaaat ggtgaagttg ccatgacaat aaaggtcata
1981 gaacctggta gtgtcaaatt taaccctttg aggactgtaa ttgcatttct gtgcctttca
2041 cttgaaaaaa aaaaaaaaa
//