LOCUS BC010664 2121 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens LIM domain and actin binding 1, mRNA (cDNA clone
IMAGE:3854371), partial cds.
ACCESSION BC010664
VERSION BC010664.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2121)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2121)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: b Column: 3.
FEATURES Location/Qualifiers
source 1..2121
/db_xref="H-InvDB:HIT000087533"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3854371"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2121
/gene="LIMA1"
/gene_synonym="EPLIN"
/gene_synonym="SREBP3"
/db_xref="GeneID:51474"
/db_xref="HGNC:HGNC:24636"
/db_xref="MIM:608364"
CDS <1..831
/gene="LIMA1"
/gene_synonym="EPLIN"
/gene_synonym="SREBP3"
/codon_start=1
/product="LIMA1 protein"
/protein_id="AAH10664.1"
/db_xref="GeneID:51474"
/db_xref="HGNC:HGNC:24636"
/db_xref="MIM:608364"
/translation="ARETPHSPGVEDAPIAKVGVLAASMEAKASSQQEKEDKPAETKK
LRIAWPPPTELGSSGSALEEGIKMSKPKWPPEDEISKPEVPEDVDLDLKKLRRSSSLK
ERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEESVGGRVAERKQVENAKASK
KNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVENGADSDEDDNSFLKQQSPQE
PKSLNWSSFVDNTFAEEFTTQNQKSQDVELWEGEVVKELSVEEQIKRNRYYDEDEDEE
"
BASE COUNT 697 a 376 c 448 g 600 t
ORIGIN
1 gcaagggaga cccctcacag cccaggggta gaagatgccc ctattgctaa ggtgggtgtc
61 ctggctgcaa gtatggaagc caaggcctcc tctcagcagg agaaggaaga caagccagct
121 gaaaccaaga agctgaggat cgcctggcca ccccccactg aacttggaag ttcaggaagt
181 gccttggagg aagggatcaa aatgtcaaag cccaaatggc ctcctgaaga cgaaatcagc
241 aagcccgaag ttcctgagga tgtcgatcta gatctgaaga agctaagacg atcttcttca
301 ctgaaggaaa gaagccgccc attcactgta gcagcttcat ttcaaagcac ctctgtcaag
361 agcccaaaaa ctgtgtcccc acctatcagg aaaggctgga gcatgtcaga gcagagtgaa
421 gagtctgtgg gtggaagagt tgcagaaagg aaacaagtgg aaaatgccaa ggcttctaag
481 aagaatggga atgtgggaaa aacaacctgg caaaacaaag aatctaaagg agagacaggg
541 aagagaagta aggaaggtca tagtttggag atggagaatg agaatcttgt agaaaatggt
601 gcagactccg atgaagatga taacagcttc ctcaaacaac aatctccaca agaacccaag
661 tctctgaatt ggtcgagttt tgtagacaac acctttgctg aagaattcac tactcagaat
721 cagaaatccc aggatgtgga actctgggag ggagaagtgg tcaaagagct ctctgtggaa
781 gaacagataa agagaaatcg gtattatgat gaggatgagg atgaagagtg acaaattgca
841 atgatgctgg gccttaaatt catgttagtg ttagcgagcc actgcccttt gtcaaaatgt
901 gatgcacata agcaggtatc ccagcatgaa atgtaattta cttggaagta actttggaaa
961 agaattcctt cttaaaatca aaaacaaaac aaaaaaacac aaaaaacaca ttctaaatac
1021 tagagataac tttacttaaa ttcttcattt tagcagtgat gatatgcgta agtgctgtaa
1081 ggcttgtaac tggggaaata ttccacctga taatagccca gattctactg tattcccaaa
1141 aggcaatatt aaggtagata gatgattagt agtatattgt tacacactat tttggaatta
1201 gagaacatac agaaggaatt taggggctta aacattacga ctgaatgcac tttagtataa
1261 agggcacagt ttgtatattt ttaaatgaat accaatttaa ttttttagta tttacctgtt
1321 aagagattat ttagtcttta aattttttag gttaattttc ttgctgtgat atatatgagg
1381 aatttactac tttatgtcct gctctctaaa ctacatcctg aactcgacgt cctgaggtat
1441 aatacaacag agcacttttt gaggcaattg aaaaaccaac ctacactctt cggtgcttag
1501 agagatctgc tgtctcccaa ataagctttt gtatctgcca gtgaatttac tgtactccaa
1561 atgattgctt tcttttctgg tgatatctgt gcttctcata attactgaaa gctgcaatat
1621 tttagtaata ccttcgggat cactgtcccc catcttccgt gttagagcaa agtgaagagt
1681 ttaaaggagg aagacgaaag aactgtctta caccacttga gctcagacct ctaaaccctg
1741 tatttccctt atgatgtccc ctttttgaga cactaatttt taaatactta ctagctctga
1801 aatatattga tttttatcac agtattctca gggtgaaatt aaaccaacta taggcctttt
1861 tcttgggatg attttctagt cttaacgttt ggggacatta taaacttgag tacatttgtt
1921 gtacacagtt gatattccaa attgtatgga tgggagggag aggtgtctta agctgtaggc
1981 ttttctttgt actgcattta tagagattta gctttaatat tttttagaga tgtaaaacat
2041 tctgctttct tagtcttacc tagtctgaaa catttttatt caataaagat tttaattaaa
2101 atttgaaaaa aaaaaaaaaa a
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