LOCUS BC010663 2836 bp mRNA linear HUM 22-FEB-2005 DEFINITION Homo sapiens phosphofurin acidic cluster sorting protein 2, mRNA (cDNA clone IMAGE:3869770), partial cds. ACCESSION BC010663 VERSION BC010663.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2836) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2836) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 13 Row: i Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..2836 /db_xref="H-InvDB:HIT000087532" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3869770" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..2836 /gene="PACS2" /gene_synonym="KIAA0602" /gene_synonym="PACS1L" /db_xref="GeneID:23241" CDS <1..2281 /gene="PACS2" /gene_synonym="KIAA0602" /gene_synonym="PACS1L" /codon_start=2 /product="PACS2 protein" /protein_id="AAH10663.1" /db_xref="GeneID:23241" /translation="TLAAGSISMAEVMQHPSEGGQVLSLCSSIKEAPVKAAEIWIASL SSQPIDHEDSTMQAGPKAKSTDNYSEEEYESFSSEQEASDDAVQGQDLDEDDFDVGKP KKQRRSIVRTTSMTRQQNFKQKVVALLRRFKVSDEVLDSEQDPAEHIPEAEEDLDLLY DTLDMEHPSDSGPDMEDDDSVLSTPKPKLRPYFEGLSHSSSQTEIGSIHSARSHKEPP SPADVPEKTRSLGGRQPSDSVSDTVALGVPGPREHPGQPEDSPEAEASTLDVFTERLP PSGRITKTESLVIPSTRSEGKQAGRRGRSTSLKERQAARPQNERANSLDNERCPDARS QLQIPRKTVYDQLNHILISDDQLPENIILVNTSDWQGQFLSDVLQRHTLPVVCTCSPA DVQAAFSTIVSRIQRYCNCNSQPPTPVKIAVAGAQHYLSAILRLFVEQLSHKTPDWLG YMRFLVIPLGSHPVARYLGSVDYRYNNFFQDLAWRDLFNKLEAQSAVQDTPDIVSRIT QYIAGANCAHQLPIAEAMLTYKQKSPDEESSQKFIPFVGVVKVGIVEPSSATSGDSDD AAPSGSGTLSSTPPSASPAAKEASPTPPSSPSVSGGLSSPSQGVGAELMGLQVDYWTA AQPADRKRDAEKKDLPVTKNTLKCTFRSLQVSRLPSSGEAAATPTMSMTVVTKEKNKK VMFLPKKAKDKDVESKSQCIEGISRLICTARQQQNMLRVLIDGVECSDVKFFQLAAQW SSHVKHFPICIFGHSKATF" BASE COUNT 622 a 924 c 842 g 448 t ORIGIN 1 gacgctggcc gcgggctcca tcagcatggc tgaggtgatg caacacccgt ctgaaggtgg 61 ccaggtgctg agcctctgca gcagcatcaa ggaggccccc gtcaaggcgg ccgagatctg 121 gatcgcctcc ctgtccagcc agcccattga ccacgaagac agcaccatgc aggccggccc 181 caaggccaag tccacggata actactccga ggaggagtat gagagcttct cctccgagca 241 ggaggccagt gacgacgccg tgcaggggca ggacttggac gaggacgact ttgacgtggg 301 gaagccgaag aagcagcgga gatcgattgt aagaacgacg tccatgacca ggcaacagaa 361 cttcaagcag aaagtggtag cgctgctgcg gaggttcaaa gtgtccgacg aggtcctgga 421 ctcggagcag gaccctgcgg agcacatccc cgaggcagag gaggacctgg acctcctgta 481 tgacaccctg gacatggagc accccagcga cagcggcccc gacatggagg atgacgacag 541 cgtcctcagc acccccaagc cgaagctgcg gccatacttt gaaggcctgt cgcactcgag 601 ctcgcagacg gagattggga gcatccacag cgcccgcagc cacaaggagc ccccaagccc 661 ggctgacgtg cccgagaaga cgcggtccct gggaggcagg cagccgagcg acagtgtctc 721 tgacacggtg gccctcggtg tgccaggccc gagggagcac cctggacagc ctgaggacag 781 ccccgaggct gaggcctcca ccctggatgt gttcacggag aggctgccgc ccagcgggag 841 gatcaccaag acagagtccc ttgtcatccc ctccaccagg tccgagggga agcaggctgg 901 ccgacggggc cggagcacat ccttgaagga gcggcaggca gcacggcccc agaatgagcg 961 ggccaacagc ctggacaacg agcgctgccc ggacgcccgg agccagctac agatccccag 1021 gaagactgtg tatgaccagc tcaaccacat cctcatctcc gatgaccagc ttcccgaaaa 1081 catcatcctt gtcaacacct cggactggca ggggcagttc ctctccgacg tcctgcagag 1141 gcacacgctc cccgtggtgt gcacgtgctc tcccgcggac gtccaggcgg ccttcagcac 1201 catcgtctca cggatacaga gatactgcaa ctgcaattcc cagcccccga cccccgtgaa 1261 gatcgccgtg gcgggagcgc agcattacct cagtgccatc ctgcggctct ttgtggagca 1321 gctgtcccac aagacacccg actggctcgg ctacatgcgc ttcctggtca tcccactggg 1381 ctcccacccc gtggccaggt acctaggctc cgtggactac cgctacaaca acttcttcca 1441 ggacctggcc tggagagacc tgttcaacaa gctggaggcc cagagtgcgg tacaggacac 1501 gccagacatt gtgtcacgca tcacgcagta catcgcaggg gccaactgtg cccaccagct 1561 ccccatcgca gaggccatgc tgacctacaa gcagaagagc cctgacgaag agtcctccca 1621 aaagttcatt ccctttgtcg gggttgtgaa ggttggaatt gtggagccat cctcggccac 1681 atcaggcgac tcggacgacg cggccccctc gggctctggc acgctctcct ccaccccgcc 1741 gtccgcatct cctgcggcca aggaggcctc acccaccccg ccctcctccc cgtcggtgag 1801 cggaggcctg tcctccccca gccagggtgt cggcgccgag ctgatggggc tgcaggtgga 1861 ctactggacg gcagcacagc ctgcggacag gaagagggac gccgagaaga aggacctgcc 1921 tgtcaccaaa aacacgctca agtgcacttt ccggtccctc caggtcagca ggctgcccag 1981 cagcggcgag gctgcagcca cgcccaccat gtccatgacc gtggtcacca aggagaagaa 2041 caagaaggtg atgtttctgc ccaagaaagc gaaggacaag gacgtggagt ctaagagcca 2101 gtgcattgag ggcatcagcc ggctcatctg cactgccagg cagcagcaga acatgctgcg 2161 ggtcctcatc gacggcgtgg agtgcagcga cgtcaagttc ttccagctgg ccgcgcagtg 2221 gtcctcgcac gtgaagcact tccccatctg catcttcgga cactccaagg ccaccttcta 2281 gccccaccca ccagggggcc cacctcctgc cccatgctgt gaggggccca gctgcatttc 2341 tgttaacatt tcagtttact acagagacag acgcttaaaa cacaaagaga aacagtctta 2401 agtatgaatg tgctcacaac gtggaaacta acgggggagc tcctgccagg agccgaataa 2461 ctgctctgct tattaacccg aacgttcggc ccggggctgg gaagccagaa ggacgatgct 2521 gagccatgga tcgcggaagg cgtcctctgg cctcaggagc cacccagagc ctcacaggct 2581 gagttcttgc ctctgtgtcc tgtccttcct ggaagtcagg actctgcttc ctcagggagc 2641 ccggggaagg cggagctcag tggccacagg ccgagggcca tggggccgct cagtcccgtt 2701 ggggttgtcc tgagttgagc ctgggggggc cgtcctgccc gcctaagaga tgcccccagc 2761 accgcacact cgtggttccc aataaactcc tgcctgcggc ggaggtttta tagcagcaga 2821 taaaaaaaaa aaaaaa //