LOCUS BC010642 2110 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens zinc finger protein 22 (KOX 15), mRNA (cDNA clone
MGC:9735 IMAGE:3852749), complete cds.
ACCESSION BC010642
VERSION BC010642.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2110)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2110)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: a Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55775473.
FEATURES Location/Qualifiers
source 1..2110
/db_xref="H-InvDB:HIT000035027"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9735 IMAGE:3852749"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2110
/gene="ZNF22"
/gene_synonym="HKR-T1"
/gene_synonym="KOX15"
/gene_synonym="Zfp422"
/gene_synonym="ZNF422"
/db_xref="GeneID:7570"
/db_xref="HGNC:HGNC:13012"
/db_xref="MIM:194529"
CDS 134..808
/gene="ZNF22"
/gene_synonym="HKR-T1"
/gene_synonym="KOX15"
/gene_synonym="Zfp422"
/gene_synonym="ZNF422"
/codon_start=1
/product="zinc finger protein 22 (KOX 15)"
/protein_id="AAH10642.1"
/db_xref="GeneID:7570"
/db_xref="HGNC:HGNC:13012"
/db_xref="MIM:194529"
/translation="MRLAKPKAGISRSSSQGKAYENKRKTGRQRQKWGMTIRFDSSFS
RLRRSLDDKPYKCTECEKSFSQSSTLFQHQKIHTGKKSHKCADCGKSFFQSSNLIQHR
RIHTGEKPYKCDECGESFKQSSNLIQHQRIHTGEKPYQCDECGRCFSQSSHLIQHQRT
HTGEKPYQCSECGKCFSQSSHLRQHMKVHKEEKPRKTRGKNIRVKTHLPSWKAGTGRK
SVAGLR"
BASE COUNT 661 a 390 c 419 g 640 t
ORIGIN
1 gcgggaggcg cccagcgagc cagagtggtg gctggtcccg cgcgaaaatt ctgagctgta
61 cacctctagg aaatgaaaca ctagttcaga agaagcctgt aaactctctt acaaatacat
121 ttggttattc accatgaggt tagcaaagcc taaagcgggt atttctcgga gctcaagcca
181 aggaaaggcc tatgagaaca agcgcaaaac aggccggcag cggcagaagt ggggcatgac
241 tattcgattt gactcaagct tcagtagact cagaagaagc ttggatgaca aaccctataa
301 atgtactgaa tgtgaaaaga gtttcagtca gagttcaact ctttttcaac accagaagat
361 ccatactgga aagaaatccc ataaatgtgc tgattgtggg aaaagtttct ttcagagttc
421 taatctcatt cagcatcgac ggatccatac gggggaaaag ccctacaaat gtgatgagtg
481 tggagaaagc ttcaaacaga gctcaaatct cattcagcac cagagaattc atactggaga
541 aaaaccctat cagtgtgatg agtgtggccg gtgtttcagc cagagctccc accttattca
601 acatcagaga acccacactg gggagaaacc ctaccagtgc agtgaatgtg gcaaatgttt
661 cagtcagagc tctcatctga ggcagcacat gaaggtgcat aaagaagaga agcctcgtaa
721 aacccggggc aaaaatatca gggtgaagac tcacttaccc tcttggaaag ctggtacagg
781 aaggaagtct gtggctggtc tccgttaagt atagggcttt ttgacagctt tttgagacct
841 cttaagaaaa aataaaaagt aaaaaatgaa aggaatcttt tttagaaata gagatgcttt
901 atagtagatc acttaaatac tggatctttt gctagtgtga aaacattggg aatttaatga
961 cattattgag ctgaaagaaa ttacatgagt ccagctaccc tcatttcttt tttatgtgac
1021 atggagcaca aagaactgaa aatatgtttt gagggagcat gacatccttg acctcatttg
1081 aaattacttc cattttcaaa aaccatcatg ttttgcagat acattttgag aaaaaccatc
1141 atgttttgag gatacatttg tgaaagtgca ggcatgccaa tgactactca gttttaggac
1201 ttttgtggaa gaaaaaatta aaagggagaa gaaatcaatt ccactacttt tgaagttctg
1261 caacagatga gattttgttt gtaaagtttt gtagtatatt aaccattggt ttatcactct
1321 agattcaaca tattaaaatg tattcaagct cacagatttt taatcagtaa ggcctatcta
1381 tattagttgt cttttatttc ttctccttgt ggacagttgt taatgaaagg agtaaggatt
1441 tccctttttt tgttttgttt gttttgtttt ttttaaccaa attcttagag atactataga
1501 atccaaatga gaactgaatt ggacctcaag tcttctattc ctactaatag agttctttgt
1561 gatggtaact gctgtgtcgt ttgttttcca caagttggga tggattcatg tcgatacatc
1621 cccatgccct tgacctcttc tggcattctc ctgtgctctg acaaactgag ccagcctttt
1681 agatctacat gaataaacaa actattttac caagaaaaat ctcagcttgc ttactgctta
1741 attaaaaacc tacaatttac acacctccct gccttcaaga ctgtgagctt tggatagccc
1801 tgcttaaatg tttgtcaaca acaagagtcg taatgtgtca gtacattgta gctcctttga
1861 aatttaactc tttctgtgtt acatgaattg ttttaaggag tccggcaaac atgtttcttc
1921 acttccatga gaatggtgcc aagtgtcaga ctctaatgag ccctcagctc aggttttaat
1981 ttctattgaa tgctaacatt cttctgattt tttggtatct tttataatca tatcggtttc
2041 tgctgtatta atgacaatta ttcatgaaaa taaaaaatga aatattttgt atactaaaaa
2101 aaaaaaaaaa
//