LOCUS BC010523 1551 bp mRNA linear HUM 27-OCT-2008
DEFINITION Homo sapiens ribosomal protein, large, P0 pseudogene 2, mRNA (cDNA
clone IMAGE:4151192).
ACCESSION BC010523
VERSION BC010523.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1551)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1551)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: c Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction, Similarity but not identity
to protein.
FEATURES Location/Qualifiers
source 1..1551
/db_xref="H-InvDB:HIT000034982"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4151192"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 418 a 393 c 408 g 332 t
ORIGIN
1 aagaaaagca gagacgattg gattacagca attgctctta taactcctct ccgcccaccc
61 cctcgatgag aagctggttt gaaggactga gtatcaaatc cctactgagc tctgaggttc
121 caggtgtgga tggagtgtgg ggcccatgtg tgtgtcagtg tgtgtgggtg tgattgtgtg
181 agcaactggg tgtgtgaggt tcaggcccag tcggcttgtc cagacgccag gcctgagatg
241 ccctgggggt gctaagaggg gtagagagaa gccaaaggaa cacaggcttt gaaacgaggc
301 agaattgagt tggagtccca accccaccaa cctcacctct cttcactctt caggcagcgt
361 agaaaacaat gcctgccttt tgccaggcat cctcatggaa gtgacatcgt ctttaaacct
421 gtgtggcaat ccctgacgca ccaccgtgat gcccagggaa gacagggtga cctggaaacc
481 caactacttc cttaagatca tccagctatt ggatgattat ctgaaatgtt tcatcgtggg
541 agcagacaat gtgaactcca agcagatgca gcagatccgc atgtccctct gcggcaaggc
601 cgtggtgctg atgggcaaga acgccatgac gcgcaaggcc atccgagggc acctggaaaa
661 cagcccagct ctggagaaac tgctgcctcg catctgggag aatgtgggct ttgtgttcac
721 caaggaggac ctcactgaga tcagggacct gctgctggcc aataaggtgc cagctgccac
781 ccgtgctggt gccattaccc catgtgaagt cactgtgcca gcccagaata ctggtctgga
841 ccccgagaag acctcctttt tccaggcttt aggtatcatc actaaaatct ccaggggcgc
901 cattgaaatc ctgagtgatg cgcagctgat caagacggga gacaaagtgg gagccagtga
961 agccacgctg ctgaccatgc tcaacatctc ccccttctcc tctgggctgg tcatccagca
1021 ggtgttcgac aacggcagca tctacaaccc tgaagtgctt gacatcacag aggaaactct
1081 gtattctcgc ttcctggagg gtgtccgcaa tgttgccggt gtctgtccgc agatccacta
1141 cccaactgtt gcatcagtgc cccattctat catcgacggg tacaaacgag tcctggcctt
1201 gtctgtggag actgatgaca acttcctgct tgctgaaaag gtcaaggcct tcttggctga
1261 tccatctgcc tttgtggctg cagcccctgt ggctgctgcc accacagctg ctcctgctgc
1321 tgctgctgca gccccagcta aggatgaagc caaggaagag tcggagggag gagtcagacg
1381 aggatatggg attgggtctc tttgactaat caccaaaaag caaccaactt agccagcttt
1441 atttgcaaaa caaggaaata aaggcttact tctttaaaaa aaaaaaaaga aaagaaaaaa
1501 agaagaaaga aagaaacaaa gaaagaaaga aagaaaaaaa aaaaaaaaaa a
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