LOCUS BC010521 2724 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens integrin alpha FG-GAP repeat containing 3, mRNA (cDNA
clone IMAGE:4151114), partial cds.
ACCESSION BC010521
VERSION BC010521.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2724)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2724)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: k Column: 16.
FEATURES Location/Qualifiers
source 1..2724
/db_xref="H-InvDB:HIT000087503"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4151114"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2724
/gene="ITFG3"
/gene_synonym="DKFZP761D0211"
/gene_synonym="FLJ32603"
/gene_synonym="gene +108"
/gene_synonym="gs19"
/db_xref="GeneID:83986"
/db_xref="HGNC:HGNC:14163"
CDS <1..1581
/gene="ITFG3"
/gene_synonym="DKFZP761D0211"
/gene_synonym="FLJ32603"
/gene_synonym="gene +108"
/gene_synonym="gs19"
/codon_start=1
/product="ITFG3 protein"
/protein_id="AAH10521.1"
/db_xref="GeneID:83986"
/db_xref="HGNC:HGNC:14163"
/translation="NPSKNEDNVKSAPPQSRLSRCRAAAFFLSLFLCLFVVFVVSFVI
PCPDRPASQRMWRIDYSAAVIYDFLAVDDINGDRIQDVLFLYKNTNSSNNFSRSCVDE
GFSSPCTFAAAVSGANGSTLWERPVAQDVALVECAVPQPRGSEAPSACILVGRPSSFI
AVNLFTGETLWNHSSSFSGNASILSPLLQVPDVDGDGAPDLLVLTQEREEVSGHLYSG
STGHQIGLRGSLGVDGESGFLLHVTRTGAHYILFPCASSLCGCSVKGLYEKVTGSGGP
FKSDPHWESMLNATTRRMLSHSSGAVRYLMHVPGNAGADVLLVGSEAFVLLDGQELTP
RWTPKAAHVLRKPIFGRYKPDTLAVAVENGTGTDRQILFLDLGTGAVLCSLALPSLPG
GPLSASLPTADHRSAFFFWGLHELGSTSETETGEARHSLYMFHPTLPRVLLELANVST
HIVAFDAVLFEPSRHAAYILLTGPADSEAPGLVSVIKHKVRDLVPSSRVVRLGEGGPD
SDQAIRDRFSRLRYQSEA"
BASE COUNT 536 a 879 c 767 g 542 t
ORIGIN
1 aatccatcaa aaaatgagga taacgtgaaa agcgcgcctc cacagtcccg gctctcccgg
61 tgccgagcgg cggcgttttt tctttcattg tttctctgcc tttttgtggt gttcgtcgtc
121 tcattcgtca tcccgtgtcc agaccggccg gcgtcacagc gaatgtggag gatagactac
181 agtgccgctg ttatctatga ctttctggct gtggatgata taaacgggga caggatccaa
241 gatgttcttt ttctttataa aaacaccaac agcagcaaca atttcagccg atcctgtgtg
301 gacgaaggct tttcctctcc ctgcaccttt gcagctgctg tgtcgggggc caacggcagc
361 acgctctggg agagacctgt ggcccaagac gtggccctcg tggagtgtgc tgtgccccag
421 ccaagaggca gtgaggcacc ttctgcctgc atcctggtgg gcagacccag ttctttcatt
481 gcagtcaact tgttcacagg ggaaaccctg tggaaccaca gcagcagctt cagcgggaat
541 gcgtccatcc tgagccctct gctgcaggtg cctgatgtgg acggcgatgg ggccccagac
601 ctgctggttc tcacccagga gcgggaggag gttagtggcc acctctactc cggcagcacc
661 gggcaccaga ttggcctcag aggcagcctt ggtgtggacg gggaaagtgg cttcctcctt
721 cacgtcacca ggacaggtgc ccactacatc ctctttccct gcgcaagctc cctctgcggc
781 tgctctgtga agggtctcta cgagaaggtg accgggagcg gcggcccgtt caagagtgac
841 ccgcactggg agagcatgct caatgccacc acccgcagga tgctttccca cagctctgga
901 gcagtgcgct acctgatgca tgtcccaggg aacgccggtg cagatgtgct tcttgtgggc
961 tcagaggcct tcgtgctgct ggacgggcag gagctgacgc ctcgctggac acccaaggca
1021 gcccatgtcc tgagaaaacc catcttcggc cgctacaaac cagacacctt ggctgtagcc
1081 gttgaaaacg gaactggcac cgacagacag atcctgtttc tggaccttgg cactggagcc
1141 gtcctgtgta gcctagccct cccgagcctc cctgggggtc cactgtccgc cagcctgccg
1201 accgcagacc accgctcagc cttcttcttc tggggcctcc acgagctggg gagcaccagc
1261 gagacggaga ccggggaggc ccggcacagc ctgtacatgt tccaccccac cctgccgcgc
1321 gtgctgctgg agctggccaa tgtctctacc cacattgtcg cctttgacgc cgtcctgttt
1381 gagccaagcc gccacgccgc ctacatcctt ctgacaggcc cggcagactc agaggcaccc
1441 ggcctggtct ctgtgatcaa gcacaaggtg cgggaccttg tcccaagcag cagggtggtc
1501 cgcctgggtg agggtgggcc agacagtgac caagccatca gggaccggtt ctcccggctg
1561 cggtaccaga gtgaggcgta gaggcacgcc agccagagcc tgtggagaga ctccgcctgc
1621 tgacactaaa cgtcctggga agtgggccct tccctgggtc tctgcactga ctcccccact
1681 cctgaccctg gtgatggtcg ccactgggca gcagcagcct taccagtcct ccatgatcac
1741 acccagggac ctgcatgggt gaggggacac cctgggcctc tctcccgccc agcatcctcc
1801 ctgagtcccc acacagggcc tcactctgca ccccaccagg gtcccgctca caccaggcag
1861 ccttcatagt ggtctccctg gccaccttgg gcagagctgg gtcatgcagc accccatcct
1921 tacccggtgc cctctccttg ccagcttctc cccaggccag agcggccatc gcgtagaaag
1981 aaccagggtg tccccgggac aggccgtccc ccaccccatc ctgtagaagt ccattcccct
2041 tttccctcct gtgctctgtc ccccaaggag tcatggaact cagggtactg ggcctcaacg
2101 ggaacctgag acagctccag cttcgcagcc cttcccggag ctacaggggg atcctctagc
2161 atggggggtg tgacttggtt cctttgacca ggtcctgtga ggaagcctgg agcaagggtc
2221 tcccccagca ggatgggtgg ggcctgctct ggagctgagc ccgtggccgc tcacaggtgt
2281 ccttagtggt gttgcagctg tctactggct gcatgtgctg tgaatatccc aaggaactgg
2341 ctgtggaatg cgtgtttggg tcagtctgtg ccctctcagt agacactgga gctgctctgt
2401 ccctgaagag gccccgtgcc ccaggcatgg caagcgcctg cctctcccct tccggtgctc
2461 acacgcccac gccgtgccac ccgatgcagg actcacctct gtgccttgct gctcctgagg
2521 cccaagggca gccatggtgc tctgtactgc tcgggccgcc caggtcacag agcctgagct
2581 tcgtagccaa agcagcctga tgaccccccc cccaaggaag aaagcagaat aaacattttt
2641 gcactgcctg aaaaaccccg gtggtcaggc gtgagcctaa aaaaaaaaaa aaaaaaaaaa
2701 aaaaaaaaaa aaaaaaaaaa aaaa
//