LOCUS BC010488 1549 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens apoptosis, caspase activation inhibitor, mRNA (cDNA
clone MGC:16897 IMAGE:2900586), complete cds.
ACCESSION BC010488
VERSION BC010488.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1549)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1549)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: e Column: 1.
FEATURES Location/Qualifiers
source 1..1549
/db_xref="H-InvDB:HIT000034964"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16897 IMAGE:2900586"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1549
/gene="AVEN"
/gene_synonym="PDCD12"
/db_xref="GeneID:57099"
/db_xref="HGNC:HGNC:13509"
/db_xref="MIM:605265"
CDS 51..1139
/gene="AVEN"
/gene_synonym="PDCD12"
/codon_start=1
/product="apoptosis, caspase activation inhibitor"
/protein_id="AAH10488.1"
/db_xref="GeneID:57099"
/db_xref="HGNC:HGNC:13509"
/db_xref="MIM:605265"
/translation="MQAERGARGGRGRRPGRGRPGGDRHSERPGAAAAVARGGGGGGG
GDGGGRRGRGRGRGFRGARGGRGGGGAPRGSRREPGGWGAGASAPVEDDSDAETYGEE
NDEQGNYSKRKIVSNWDRYQDIEKEVNNESGESQRGTDFSVLLSSAGDSFSQFRFAEE
KEWDSEASCPKQNSAFYVDSELLVRALQELPLCLRLNVAAELVQGTVPLEVPQVKPKR
TDDGKGLGMQLKGPLGPGGRGPIFELKSVAAGCPVLLGKDNPSPGPSRDSQKPTSPLQ
SAGDHLEEELDLLLNLDAPIKEGDNILPDQTSQDLKSKEDGEVVQEEEVCAKPSVTEE
KNMEPEQPSTSKNVTEEELEDWLDSMIS"
BASE COUNT 421 a 349 c 466 g 313 t
ORIGIN
1 ctccgccgca gctcggctcc cgcgcgctca gcaccgccag cggcggccag atgcaggcgg
61 agcgaggagc tcggggaggc cgtgggcggc ggccaggccg cggccggcct ggcggagatc
121 gccacagcga gcggcccgga gccgcagcgg cggtagccag aggcggcggc ggaggcggcg
181 gcggggacgg aggcggacgc cggggccgtg gccgtggccg gggcttccgc ggcgctcgcg
241 gaggccgagg aggaggaggc gccccgcgag gcagccgccg ggagccggga ggctggggcg
301 caggggccag cgcgccggtt gaagatgaca gcgatgcaga gacctatgga gaagagaatg
361 atgaacaggg aaattattct aaaagaaaga ttgtctctaa ctgggatcga tatcaagata
421 ttgaaaaaga ggtcaataat gaaagtggag agtcacagag gggaacagat ttcagtgtcc
481 tccttagctc tgcaggggac tcattctcac agttccggtt tgctgaggag aaagaatggg
541 atagtgaagc ttcttgtcca aaacagaatt cagcatttta tgtggatagt gagttattgg
601 ttcgagccct tcaagagctg cctctctgcc tccgactcaa cgttgctgcc gaactggtcc
661 agggtacagt tcctttagag gttcctcagg tgaaaccaaa gagaactgat gatggcaagg
721 gattagggat gcagttaaag gggcccttgg ggcctggagg aagggggccc atctttgagc
781 tgaaatctgt ggctgctggc tgccctgtgt tgctgggcaa agacaaccca agcccgggtc
841 cttcaaggga ttctcagaaa cccacttccc cactgcagtc agcaggagac catttggaag
901 aagaactaga tctgttgctt aatttagatg cacctataaa agagggagat aacatcttac
961 cagatcagac gtctcaggac ctgaaatcca aggaagatgg ggaggtggtc caagaggaag
1021 aagtttgtgc aaaaccatct gtgactgaag aaaaaaacat ggaacctgag caaccaagta
1081 cctccaaaaa tgttaccgag gaagagctgg aagactggtt ggacagcatg atttcctaaa
1141 aaggggaaaa aaagtgcctg aagcaaatct tggttgcctt ctaacggcag gtgggcataa
1201 ggctgtcctt caggaccagc cagtttacaa gcatgtctca agctagtgtg ttccattatg
1261 ctcacagcag taaatgccta cctctgtgtt tgacatctga aagaatacat tgaagcagct
1321 tgttgcattt gtttttctgg cttagtaatc taatagattt ccttaagggc aggagataga
1381 ctctggccct tgtttctagc ctccttcctt gcagtgttta caacatagcc agtgtttaca
1441 gcatagcaga tgctgctgct gattaagaga atagatgcaa acaaggcatg catttggcca
1501 aaataaacaa atgctggtct gtcaaaaaaa aaaaaaaaaa aaaaaaaaa
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