LOCUS BC010458 1967 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens NDRG family member 2, mRNA (cDNA clone MGC:16914
IMAGE:4215141), complete cds.
ACCESSION BC010458
VERSION BC010458.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1967)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1967)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: n Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42544215.
FEATURES Location/Qualifiers
source 1..1967
/db_xref="H-InvDB:HIT000034956"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16914 IMAGE:4215141"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1967
/gene="NDRG2"
/gene_synonym="KIAA1248"
/gene_synonym="SYLD"
/db_xref="GeneID:57447"
/db_xref="HGNC:HGNC:14460"
/db_xref="MIM:605272"
CDS 55..1128
/gene="NDRG2"
/gene_synonym="KIAA1248"
/gene_synonym="SYLD"
/codon_start=1
/product="NDRG family member 2"
/protein_id="AAH10458.1"
/db_xref="GeneID:57447"
/db_xref="HGNC:HGNC:14460"
/db_xref="MIM:605272"
/translation="MAELQEVQITEEKPLLPGQTPEAAKTHSVETPYVSVTFTVYGTP
KPKRPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGY
QYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPN
AKGWMDWAAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIEL
YWNSYNNRRDLNFERGGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMAD
SGGQPQLTQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRT
LSQSSESGTLSSGPPGHTMEVSC"
BASE COUNT 461 a 507 c 549 g 450 t
ORIGIN
1 ccggagcagc cggagagcag gcgtcgggac gcagcaaaga gaggagaggc caccatggcg
61 gagctgcagg aggtgcagat cacagaggag aagccactgt tgccaggaca gacgcctgag
121 gcggccaaga ctcactctgt ggagacacca tacgtctctg tcactttcac tgtctatggc
181 acccccaaac ccaaacgccc agcgatcctt acctaccacg atgtgggact caactataaa
241 tcttgcttcc agccactgtt tcagttcgag gacatgcagg aaatcattca gaactttgtg
301 cgggttcatg tggatgcccc tggaatggaa gagggagccc ctgtgttccc tttgggatat
361 cagtacccat ctctggacca gcttgcagac atgatccctt gcgtcctgca gtacctaaat
421 ttctctacaa taattggagt tggtgttgga gctggagcct acatcctggc gagatatgct
481 cttaaccacc cggacactgt tgaaggtctt gtcctcatca acattgatcc caatgccaag
541 ggttggatgg attgggcagc ccacaagcta acaggcctca cctcttccat tccggagatg
601 atccttggac atcttttcag ccaggaagag ctctctggaa attctgagtt gatacaaaag
661 tacagaaata tcattacaca tgcacccaac ctggataaca ttgaattgta ctggaacagc
721 tacaacaacc gccgagacct gaactttgag cgtggaggtg atatcaccct caggtgtcct
781 gtgatgctgg tggtaggaga ccaagcacct catgaagatg cagtggtgga atgtaactca
841 aaactggacc ccacccagac ctcgttcctc aagatggctg actccggagg tcagccccag
901 ctgactcagc caggcaagct gaccgaggcc ttcaagtact tcctgcaagg catgggctac
961 atggcctcat cctgcatgac tcgcctgtcc cggtctcgta cagcctctct gaccagtgca
1021 gcatccgttg atggcaaccg gtcccgctct cgcaccctgt cccagagcag cgagtctgga
1081 actctttctt cggggccccc ggggcacacc atggaggtct cctgttgaat ggcccttgtt
1141 gccctagagt gggacccagc cctcacctcc cccagagcta acctgggagg tgctgaaggg
1201 gcattgggcc accgtaagca agggaaaaag ggcagatcat gcggggagat gaccttgatc
1261 tttgattgct accctaacct tgacctttaa cccgtgattc cccccagctc ctggaagaga
1321 tgtcctaata tctcttaggg acccagaccc ctaaattctc ctcctccccc attttggtgt
1381 taaggtggag agggcatatg catcctctgt cctgatctag gtgtctatag ctgaggggta
1441 agaggttgtt gtagttgtcc tggtgcctcc atcagactct ccctacttgt cccatatttg
1501 caaggggagg ggatttgggg ctggggctcc attcaccaaa gctgaggtgg cttctcatta
1561 accctttagg actctgaagg gtatggacct acgtgaatgt gtgtcagggg gagacttgct
1621 ggtgggttag tggtcctcag gatgtgatag aaacatccag tgtaaaaagg aagttggaat
1681 gggagttggc gggcagtgaa cgagtgtggg gaaggattgg tgctggggca acaggaaggg
1741 gcctggggcc gtttggctgc actaactttg gtagctcagt gtgcatctag agtgggactg
1801 gggagggagc taagcttggg ctgggctgct tggggcttgg catagggtgg aaagggctac
1861 cctggggctc tgaccacact gtagtatgtg tggagggtgc cctcccgtct cccacaactt
1921 ctgctataac aataaactgt agaggaatct gaaaaaaaaa aaaaaaa
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