LOCUS BC010425 2220 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens acyl-Coenzyme A oxidase 1, palmitoyl, mRNA (cDNA clone MGC:15225 IMAGE:3357409), complete cds. ACCESSION BC010425 VERSION BC010425.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2220) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2220) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 23 Row: a Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34304338. FEATURES Location/Qualifiers source 1..2220 /db_xref="H-InvDB:HIT000034934" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:15225 IMAGE:3357409" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2220 /gene="ACOX1" /gene_synonym="ACOX" /gene_synonym="MGC1198" /gene_synonym="PALMCOX" /gene_synonym="SCOX" /db_xref="GeneID:51" /db_xref="HGNC:HGNC:119" /db_xref="MIM:609751" CDS 80..2062 /gene="ACOX1" /gene_synonym="ACOX" /gene_synonym="MGC1198" /gene_synonym="PALMCOX" /gene_synonym="SCOX" /codon_start=1 /product="acyl-Coenzyme A oxidase 1, palmitoyl" /protein_id="AAH10425.1" /db_xref="GeneID:51" /db_xref="HGNC:HGNC:119" /db_xref="MIM:609751" /translation="MNPDLRRERDSASFNPELLTHILDGSPEKTRRRREIENMILNDP DFQHEDLNFLTRSQRYEVAVRKSAIMVKKMREFGIADPDEIMWFKNFVHRGRPEPLDL HLGMFLPTLLHQATAEQQERFFMPAWNLEIIGTYAQTEMGHGTHLRGLETIATYDPET QEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQLITKGKCYGLHAFIVPIREIGTHKPL PGITVGDIGPKFGYDEIDNGYLKMDNHRIPRENMLMKYAQVKPDGTYVKPLSNKLTYG TMVFVRSFLVGEAARALSKACTIAIRYSAVRHQSEMKPGEPEPQILDFQTQQYKLFPL LATAYAFQFVGAYMKETYHRINEGIGQGDLSELPELHALTAGLKAFTSWTANTGIEAC RMACGGHGYSHCSGLPNIYVNFTPSCTFEGENTVMMLQTARFLMKSYDQVHSGKLVCG MVSYLNDLPSQRIQPQQVAVWPTMVDINSPESLTEAYKLRAARLVEIAAKNLQKEVIH RKSKEVAWNLTSVDLVRASEAHCHYVVVKLFSEKLLKIQDKAIQAVLRSLCLLYSLYG ISQNAGDFLQGSIMTEPQITQVNQRVKELLTLIRSDAVALVDAFDFQDVTLGSVLGRY DGNVYENLFEWAKNSPLNKAEVHESYKHLKSLQSKL" BASE COUNT 599 a 531 c 550 g 540 t ORIGIN 1 ggccggcgct ggagctgcgg atttagattg tcactgccac ctcggtcggt gcttacttcg 61 ctgccagctg gtcgtcgcca tgaacccgga cctgcgcagg gagcgggatt ccgccagctt 121 caacccggag ctgcttacac acatcctgga cggcagcccc gagaaaaccc ggcgccgccg 181 agagatcgag aacatgatcc tgaacgaccc agacttccag catgaggact tgaacttcct 241 cactcgcagc cagcgttatg aggtggctgt caggaaaagt gccatcatgg tgaagaagat 301 gagggagttt ggcatcgctg accctgatga aattatgtgg tttaaaaatt ttgtgcaccg 361 agggcggcct gagcctctgg atcttcactt gggcatgttc ctgcccacct tgcttcacca 421 ggcaactgcg gagcagcagg agcgcttctt catgcccgcc tggaacttgg agatcattgg 481 cacttatgcc cagacagaga tgggtcatgg aactcacctt cgaggcttgg aaaccatagc 541 cacgtatgac cctgaaaccc aggagttcat tctcaacagt cctactgtga cctccattaa 601 atggtggcct ggtgggcttg gaaagacttc aaatcatgca atagttcttg cccagctcat 661 cactaagggg aaatgctatg gattacatgc ctttatcgta cctattcgtg aaatcgggac 721 ccataagcct ttgccaggaa ttaccgttgg tgacatcggc cccaaatttg gttatgatga 781 gatagacaat ggctacctca aaatggacaa ccatcgtatt cccagagaaa acatgctgat 841 gaagtatgcc caggtgaagc ctgatggcac atacgtgaaa ccgctgagta acaagctgac 901 ttacgggacc atggtgtttg tcaggtcctt ccttgtggga gaagctgctc gggctctgtc 961 taaggcgtgc accattgcca tccgatacag cgctgtgagg caccagtctg aaatgaagcc 1021 aggtgaacca gaaccacaga ttttggattt tcaaacccag cagtataaac tctttccact 1081 cctggccact gcctatgcct tccagtttgt gggcgcatac atgaaggaga cctatcaccg 1141 gattaacgaa ggcattggtc aaggggacct gagtgaactg cctgagcttc atgccctcac 1201 cgctggactg aaggctttca cctcctggac tgcaaacact ggcattgaag catgtcggat 1261 ggcttgtggt gggcatggct attctcattg cagtggtctt ccaaatattt atgtcaattt 1321 caccccaagc tgtacctttg agggagaaaa cactgtcatg atgctccaga cggctaggtt 1381 cctgatgaaa agttatgatc aggtgcactc aggaaagttg gtgtgtggca tggtgtccta 1441 tttgaacgac ctgcccagtc agcgcatcca gccacagcag gtagcagtct ggccaaccat 1501 ggtggatatc aacagccccg aaagcctaac cgaagcatat aaactccgtg cagccagatt 1561 agtagaaatt gctgcaaaaa accttcaaaa agaagtgatt cacagaaaaa gcaaggaggt 1621 agcttggaac ctaacttctg ttgaccttgt tcgagcaagt gaggcacatt gccactatgt 1681 ggtagttaag ctcttttcag aaaaactcct caaaattcaa gataaagcca ttcaagctgt 1741 cttaaggagt ttatgtctgc tgtattctct gtatggaatc agtcagaacg cgggggattt 1801 ccttcagggg agcatcatga cagagcctca gattacacaa gtaaaccagc gtgtaaagga 1861 gttactcact ctgattcgct cagatgctgt tgctttggtt gatgcatttg attttcagga 1921 tgtgacactt ggctctgtgc ttggccgcta tgatgggaat gtgtatgaaa acttgtttga 1981 gtgggctaag aactccccac tgaacaaagc agaggtccac gaatcttaca agcacctgaa 2041 gtcactgcag tccaagctct gaagtgtcac aaggacaagt ttaatctgct tcagaaagcg 2101 cctgtgtgca actcaaattt tgtggaatct ttttcgaatt caaatagcta tagagcaaat 2161 gataaattga ccccttttta taaatggagg gaaaaaatga acaaaaaaaa aaaaaaaaaa //