LOCUS BC010406 2319 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens TSC22 domain family, member 4, mRNA (cDNA clone
MGC:15250 IMAGE:3832780), complete cds.
ACCESSION BC010406
VERSION BC010406.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2319)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2319)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC010406.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: d Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059797.
FEATURES Location/Qualifiers
source 1..2319
/db_xref="H-InvDB:HIT000034922"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15250 IMAGE:3832780"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2319
/gene="TSC22D4"
/gene_synonym="THG-1"
/db_xref="GeneID:81628"
/db_xref="HGNC:HGNC:21696"
CDS 670..1857
/gene="TSC22D4"
/gene_synonym="THG-1"
/codon_start=1
/product="TSC22 domain family, member 4"
/protein_id="AAH10406.1"
/db_xref="GeneID:81628"
/db_xref="HGNC:HGNC:21696"
/translation="MSGGKKKSSFQITSVTTDYEGPGSPGASDPPTPQPPTGPPPRLP
NGEPSPDPGGKGTPRNGSPPPGAPSSRFRVVKLPHGLGEPYRRGRWTCVDVYERDLEP
HSFGGLLEGIRGASGGAGGRSLDSRLELASLGLGAPTPPSGLSQGPTSWLRPPPTSPG
PQARSFTGGLGQLVVPSKAKAEKPPLSASSPQQRPPEPETGESAGTSRAATPLPSLRV
EAEAGGSGARTPPLSRRKAVDMRLRMELGAPEEMGQVPPLDSRPSSPALYFTHDASLV
HKSPDPFGAVAAQKFSLAHSMLAISGHLDSDDDSGSGSLVGIDNKIEQAMDLVKSHLM
FAVREEVEVLKEQIRELAERNAALEQENGLLRALASPEQLAQLPSSGVPRLGPPAPNG
PSV"
BASE COUNT 428 a 818 c 698 g 375 t
ORIGIN
1 gagagacgga gaggcagaga cccaggggag ccgaggagcg gagacacgga cccagcaggg
61 tcacgcggga ggagactcgg gacacccact cgctggctgc caccgggagc agaggggggc
121 tcggccgccc cctcccacat cagtctccag acccttgggg cttcagaggc cgctcctagg
181 ctcctcggag gaggcgcggg tttcttcttt tccggagagc aaactttcct cggagatgcc
241 tggcaggatg agccgcggcc cccggagagg acgggacagc ctctgatcgc cgcctgcgtg
301 ccccgccact gcccatggcc aggaggcccc agggaacgga cagcccgacc tcttaggcgc
361 cgggaccctc aggctcagat cagtggccga ggccccagag tttgcaaact cagctctgga
421 gttcagcagc aacagcagca ggaaaaacct gcccctgctc ccccctcccg ccacctcccc
481 tctcctcttc tcccctcacc cagcaggcac ccccggttcc cgccaggccc tcctgccatg
541 tcggacccag acgtccccag gggctcggat gtccccgcca tgtggccccc ttgttccagg
601 ggtgcctgag ccccttcaag gagccccaac ccacccccaa ccttggccca gccctgagcc
661 ccagggacca tgagcggggg caagaagaag agtagtttcc aaatcaccag cgtcaccacg
721 gactatgagg gccctgggag cccaggggct tcggatcccc ctaccccaca gcccccaacc
781 gggcccccgc cccgcctgcc caatggggag cccagccccg atccgggggg caagggcacc
841 ccccggaatg gctccccacc acctggggcc ccttcctccc gtttccgggt ggtgaagctg
901 ccccacggcc tgggagagcc ttatcgccgc ggtcgctgga cgtgtgtgga tgtttatgag
961 cgagacctgg agccccacag cttcggcgga ctcctggagg gaattcgagg ggcctcaggg
1021 ggcgccgggg gcagatcttt ggattccagg ttggagctgg ccagcctcgg cctgggcgcc
1081 cccaccccac cgtcaggcct gtctcagggc cccacctcct ggctccgtcc accccccacc
1141 tctcctggac ctcaggcccg ctccttcact gggggactgg gccagctggt ggtgcccagc
1201 aaagccaagg cagagaaacc cccactgtcg gcctcctcac cccagcagcg ccccccagag
1261 cctgagaccg gtgagagtgc gggcacatcc cgggctgcca cgcccctgcc ctctctgagg
1321 gtggaagcgg aggctggggg ctcaggggcc aggacccctc cactgtcccg gaggaaagct
1381 gtagacatgc ggctgcggat ggagttgggt gctccagaag agatggggca ggtgccccca
1441 cttgactctc gccccagctc cccagccctc tacttcaccc acgatgccag cctggttcac
1501 aaatctccag accccttcgg agcagtagca gctcagaagt tcagcctggc ccactccatg
1561 ttggccatca gtggtcacct agacagcgac gatgatagtg gctccggaag cctggttggc
1621 attgacaaca aaatcgagca agccatggac ttggtgaagt cccacctcat gtttgcggtc
1681 cgggaggagg tggaggtgct gaaggagcag atccgggaat tggcggagcg gaacgctgcg
1741 ctggagcagg agaatgggct gctgcgcgcc ctggccagcc cggagcagct ggctcagctg
1801 ccctcctcgg gggtcccacg gcttgggccc cctgcgccca atgggccctc cgtctgagcc
1861 tcccttccct tacaatgtgc ctttggggct gcccggcctt gcgtcagccg cctgccccct
1921 cttcctatgc agctttaatg tccccgtgtc cccggggtgg gagttcaagg ctcagtaatg
1981 gcctggtccc ccggcccctg ccccatctcc tcatcatccc cagccttgat ggaggaggga
2041 gggcttcagg acggggcgtc agagggagcc ccctctggga gggaaccaac ccccaccctc
2101 cctcctggga ccccccagca gtagacggct tgggggagtc ggaggctccc cggcagacac
2161 cccaccccca tcttgttccc ttgaggtgcc tcctctcctc tgcccagggg agggagtgtg
2221 gacagtatct ggaagttctg ggattcaggt tgttattaaa ataataataa taattaaaaa
2281 ctctgaagaa acttaaaaaa aaaaaaaaaa aaaaaaaaa
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