LOCUS       BC010362                2698 bp    mRNA    linear   HUM 11-SEP-2007
DEFINITION  Homo sapiens vacuolar protein sorting 35 homolog (S. cerevisiae),
            mRNA (cDNA clone MGC:13402 IMAGE:4249949), complete cds.
ACCESSION   BC010362
VERSION     BC010362.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2698)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2698)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: CLONTECH
            cDNA Library Preparation: CLONTECH Laboratories, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 19 Row: i Column: 6
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 41352714.
FEATURES             Location/Qualifiers
     source          1..2698
                     /db_xref="H-InvDB:HIT000034898"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:13402 IMAGE:4249949"
                     /tissue_type="Prostate"
                     /clone_lib="NIH_MGC_83"
                     /lab_host="DH10B"
                     /note="Vector: pDNR-LIB"
     gene            1..2698
                     /gene="VPS35"
                     /gene_synonym="DKFZp434E1211"
                     /gene_synonym="DKFZp434P1672"
                     /gene_synonym="MEM3"
                     /db_xref="GeneID:55737"
                     /db_xref="HGNC:HGNC:13487"
                     /db_xref="MIM:606931"
     CDS             21..2411
                     /gene="VPS35"
                     /gene_synonym="DKFZp434E1211"
                     /gene_synonym="DKFZp434P1672"
                     /gene_synonym="MEM3"
                     /codon_start=1
                     /product="vacuolar protein sorting 35 homolog (S.
                     cerevisiae)"
                     /protein_id="AAH10362.1"
                     /db_xref="GeneID:55737"
                     /db_xref="HGNC:HGNC:13487"
                     /db_xref="MIM:606931"
                     /translation="MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALK
                     HASNMLGELRTSMLSPKSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAG
                     NIIPRLYLLITVGVVYVKSFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNI
                     LPDEGEPTDEETTGDISDSMDFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRI
                     LVGTNLVRLSQLEGVNVERYKQIVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHL
                     QTLNPFLRACAELHQNVNVKNIIIALIDRLALFAHREDGPGIPADIKLFDIFSQQVAT
                     VIQSRQDMPSEDVVSLQVSLINLAMKCYPDRVDYVDKVLETTVEIFNKLNLEHIATSS
                     AVSKELTRLLKIPVDTYNNILTVLKLKHFHPLFEYFDYESRKSMSCYVLSNVLDYNTE
                     IVFQDQVDSIMNLVSTLIQDQPDQPVEDPDPEDFADEQSLVGRFIHLLRSEDPDQQYL
                     ILNTARKHFGAGGNQRIRFTLPPLVFAAYQLAFRYKENSKVDDKWEKKCQKIFSFAHQ
                     TISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQ
                     LAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRN
                     TDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTI
                     QVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGLIL"
BASE COUNT          827 a          535 c          584 g          752 t
ORIGIN      
        1 gggggctctg gggagtcgcc atgcctacaa cacagcagtc ccctcaggat gagcaggaaa
       61 agctcttgga tgaagccata caggctgtga aggtccagtc attccaaatg aagagatgcc
      121 tggacaaaaa caagcttatg gatgctctaa aacatgcttc taatatgctt ggtgaactcc
      181 ggacttctat gttatcacca aagagttact atgaacttta tatggccatt tctgatgaac
      241 tgcactactt ggaggtctac ctgacagatg agtttgctaa aggaaggaaa gtggcagatc
      301 tctacgaact tgtacagtat gctggaaaca ttatcccaag gctttacctt ttgatcacag
      361 ttggagttgt atatgtcaag tcatttcctc agtccaggaa ggatattttg aaagatttgg
      421 tagaaatgtg ccgtggtgtg caacatccct tgaggggtct gtttcttcga aattaccttc
      481 ttcagtgtac cagaaatatc ttacctgatg aaggagagcc aacagatgaa gaaacaactg
      541 gtgacatcag tgattccatg gattttgtac tgctcaactt tgcagaaatg aacaagctct
      601 gggtgcgaat gcagcatcag ggacatagcc gagatagaga aaaaagagaa cgagaaagac
      661 aagaactgag aattttagtg ggaacaaatt tggtgcgcct cagtcagttg gaaggtgtaa
      721 atgtggaacg ttacaaacag attgttttga ctggcatatt ggagcaagtt gtaaactgta
      781 gggatgcttt ggctcaagaa tatctcatgg agtgtattat tcaggttttc cctgatgaat
      841 ttcacctcca gactttgaat ccttttcttc gggcctgtgc tgagttacac cagaatgtaa
      901 atgtgaagaa cataatcatt gctttaattg atagattagc tttatttgct caccgtgaag
      961 atggacctgg aatcccagcg gatattaaac tttttgatat attttcacag caggtggcta
     1021 cagtgataca gtctagacaa gacatgcctt cagaggatgt tgtatcttta caagtctctc
     1081 tgattaatct tgccatgaaa tgttaccctg atcgtgtgga ctatgttgat aaagttctag
     1141 aaacaacagt ggagatattc aataagctca accttgaaca tattgctacc agtagtgcag
     1201 tttcaaagga actcaccaga cttttgaaaa taccagttga cacttacaac aatattttaa
     1261 cagtcttgaa attaaaacat tttcacccac tctttgagta ctttgactac gagtccagaa
     1321 agagcatgag ttgttatgtg cttagtaatg ttctggatta taacacagaa attgtctttc
     1381 aagaccaggt ggattccata atgaatttgg tatccacgtt gattcaagat cagccagatc
     1441 aacctgtaga agaccctgat ccagaagatt ttgctgatga gcagagcctt gtgggccgct
     1501 tcattcatct gctgcgctct gaggaccctg accagcagta cttgattttg aacacagcac
     1561 gaaaacattt tggagctggt ggaaatcagc ggattcgctt cacactgcca cctttggtat
     1621 ttgcagctta ccagctggct tttcgatata aagagaattc taaagtggat gacaaatggg
     1681 aaaagaaatg ccagaagatt ttttcatttg cccaccagac tatcagtgct ttgatcaaag
     1741 cagagctggc agaattgccc ttaagacttt ttcttcaagg agcactagct gctggggaaa
     1801 ttggttttga aaatcatgag acagtcgcat atgaattcat gtcccaggca ttttctctgt
     1861 atgaagatga aatcagcgat tccaaagcac agctagctgc catcaccttg atcattggca
     1921 cttttgaaag gatgaagtgc ttcagtgaag agaatcatga acctctgagg actcagtgtg
     1981 cccttgctgc atccaaactt ctaaagaaac ctgatcaggg ccgagctgtg agcacctgtg
     2041 cacatctctt ctggtctggc agaaacacgg acaaaaatgg ggaggagctt cacggaggca
     2101 agagggtaat ggagtgccta aaaaaagctc taaaaatagc aaatcagtgc atggacccct
     2161 ctctacaagt gcagcttttt atagaaattc tgaacagata tatctatttt tatgaaaagg
     2221 aaaatgatgc ggtaacaatt caggttttaa accagcttat ccaaaagatt cgagaagacc
     2281 tcccgaatct tgaatccagt gaagaaacag agcagattaa caaacatttt cataacacac
     2341 tggagcattt gcgcttgcgg cgggaatcac cagaatccga ggggccaatt tatgaaggtc
     2401 tcatccttta aaaaggaaat agctcaccat actcctttcc atgtacatcc agtgagggtt
     2461 ttattacgct aggtttccct tccatagatt gtgcctttca gaaatgctga ggtaggtttc
     2521 ccatttctta cctgtgatgt gttttaccca gcacctccgg acactcacct tcaggacctt
     2581 aataaaatta ttcacttggt aagtgttcaa gtctttctga tcaccccaag tagcatgact
     2641 gatctgcaat ttaaaattcc tgtgatctgc aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//