LOCUS BC010276 2144 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens beclin 1, autophagy related, mRNA (cDNA clone MGC:5218 IMAGE:2901072), complete cds. ACCESSION BC010276 VERSION BC010276.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2144) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2144) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 3 Row: i Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19923741. FEATURES Location/Qualifiers source 1..2144 /db_xref="H-InvDB:HIT000034876" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:5218 IMAGE:2901072" /tissue_type="Cervix, carcinoma" /clone_lib="NIH_MGC_12" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2144 /gene="BECN1" /gene_synonym="ATG6" /gene_synonym="beclin1" /gene_synonym="VPS30" /db_xref="GeneID:8678" /db_xref="HGNC:HGNC:1034" /db_xref="MIM:604378" CDS 134..1486 /gene="BECN1" /gene_synonym="ATG6" /gene_synonym="beclin1" /gene_synonym="VPS30" /codon_start=1 /product="beclin 1, autophagy related" /protein_id="AAH10276.1" /db_xref="GeneID:8678" /db_xref="HGNC:HGNC:1034" /db_xref="MIM:604378" /translation="MEGSKTSNNSTMQVSFVCQRCSQPLKLDTSFKILDRVTIQELTA PLLTTAQAKPGETQEEETNSGEEPFIETPRQDGVSRRFIPPARMMSTESANSFTLIGE ASDGGTMENLSRRLKVTGDLFDIMSGQTDVDHPLCEECTDTLLDQLDTQLNVTENECQ NYKRCLEILEQMNEDDSEQLQMELKELALEEERLIQELEDVEKNRKIVAENLEKVQAE AERLDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQTQLDKLKKTNVFNATFHI WHSGQFGTINNFRLGRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYG NHSYLESLTDKSKELPLYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCL PYRMDVEKGKIEDTGGSGGSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQFYNK " BASE COUNT 625 a 438 c 535 g 546 t ORIGIN 1 gctgaagaca gagcgatggt agttctggag gcctcgctcc ggggccgacc cgaggccaca 61 gtgcctccgc ggtagaccgg acttgggtga cgggctccgg gctcccgagg tgaagagcat 121 cgggggctga gggatggaag ggtctaagac gtccaacaac agcaccatgc aggtgagctt 181 cgtgtgccag cgctgcagcc agcccctgaa actggacacg agtttcaaga tcctggaccg 241 tgtcaccatc caggaactca cagctccatt acttaccaca gcccaggcga aaccaggaga 301 gacccaggag gaagagacta actcaggaga ggagccattt attgaaactc ctcgccagga 361 tggtgtctct cgcagattca tccccccagc caggatgatg tccacagaaa gtgccaacag 421 cttcactctg attggggagg catctgatgg cggcaccatg gagaacctca gccgaagact 481 gaaggtcact ggggaccttt ttgacatcat gtcgggccag acagatgtgg atcacccact 541 ctgtgaggaa tgcacagata ctcttttaga ccagctggac actcagctca acgtcactga 601 aaatgagtgt cagaactaca aacgctgttt ggagatctta gagcaaatga atgaggatga 661 cagtgaacag ttacagatgg agctaaagga gctggcacta gaggaggaga ggctgatcca 721 ggagctggaa gacgtggaaa agaaccgcaa gatagtggca gaaaatctcg agaaggtcca 781 ggctgaggct gagagactgg atcaggagga agctcagtat cagagagaat acagtgaatt 841 taaacgacag cagctggagc tggatgatga gctgaagagt gttgaaaacc agatgcgtta 901 tgcccagacg cagctggata agctgaagaa aaccaacgtc tttaatgcaa ccttccacat 961 ctggcacagt ggacagtttg gcacaatcaa taacttcagg ctgggtcgcc tgcccagtgt 1021 tcccgtggaa tggaatgaga ttaatgctgc ttggggccag actgtgttgc tgctccatgc 1081 tctggccaat aagatgggtc tgaaatttca gagataccga cttgttcctt acggaaacca 1141 ttcatatctg gagtctctga cagacaaatc taaggagctg ccgttatact gttctggggg 1201 gttgcggttt ttctgggaca acaagtttga ccatgcaatg gtggctttcc tggactgtgt 1261 gcagcagttc aaagaagagg ttgagaaagg cgagacacgt ttttgtcttc cctacaggat 1321 ggatgtggag aaaggcaaga ttgaagacac aggaggcagt ggcggctcct attccatcaa 1381 aacccagttt aactctgagg agcagtggac aaaagctctc aagttcatgc tgacgaatct 1441 taagtggggt cttgcttggg tgtcctcaca attttataac aaatgacttt tttccttagg 1501 gggaggtttg ccttaaaggc ttttaatttt gttttgtttg caaacatgtt ttaaattaaa 1561 ttcgggtaat attaaacagt acatgtttac aataccaaaa aagaaaaaat ccacaaaagc 1621 cactttattt taaaatatca tgtgacagat actttccaga gctacaacat gccatctata 1681 gttgccagcc ctggtcagtt ttgattctta accccatgga ctcctttccc tttcttctct 1741 gaaaaaaact aatttaaatt tgcttttctt ttttttaact gagttgaatt gagattgatg 1801 tgttttcact ggatttttat ctctctcaac ttcctgcact taacaatatg aaatagaaac 1861 ttttgtcttt actgagatga ggatatgttt gagatgcaca gttggataat gtgggaaaat 1921 gacatctaag ctttacctgg tcaccatgtg atgtgatcag atgcttgaaa tttaacactt 1981 ttcacttggt tcttatactg aatgccgact ctgctctgtg ttagagatat gaaatggtgt 2041 ttgatactgt ttgagacatt atggagagat ttaattattt gtaataaaag atttgctgca 2101 gtctgaaaac tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa //