LOCUS BC010227 2638 bp mRNA linear HTC 11-SEP-2007
DEFINITION Homo sapiens forkhead box N3, mRNA (cDNA clone IMAGE:4150549), with
apparent retained intron.
ACCESSION BC010227
VERSION BC010227.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2638)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2638)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: e Column: 16
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2638
/db_xref="H-InvDB:HIT000087459"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4150549"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 710 a 658 c 654 g 616 t
ORIGIN
1 caagtattca tccttctgaa ggctgggcgc caggcactaa cagacaggca gctgcctccc
61 agacataagg agcatgggtc ctaaccagga ataagcttca cagccattgc tgtcaggcca
121 agccgtggtc caggcacctg caggcattaa ttcgtgtcct cagccccaca cccacgggga
181 gcaggtgtag ttactattcc cactttcgcg ataaggaagc acaaggaaag tacatcgctc
241 agatgtaaag acacaaagaa ataatcagag gtgtgatgag tgctacagac gccttatagg
301 catgggtagc agggaccttg ttatagggaa atcacaaagg agggtcggtc tggtgatgta
361 gctaagacct caagtctgag agtcagactt tgattccagt ccctgctccg caagtgatca
421 gttgtgtgac tttaagtaca tcactgaact tctccaggct tcacttcgag ccactgtaaa
481 ataaggatgc taatatccac cttacggagt taaacatggt cctctgcaca gacttagcag
541 agcgcctggc aggtgttgag ttcgggaagt cgtagtttat tgccctctgg tctgtgatgc
601 gaccctggct tgcctctctg ttaggctgca acatcgctgt ggcagtgtct atatccgatc
661 caaccccgtg tccctccccc agaaccctcc ctaaggtcat gcatttctgt taggcgctca
721 gtgagtattt gtagattgca tgaacgaggg agggaatgca tgagtgagta gctgtcacca
781 catggcaggt atctttgctg aacactggtt tagtcttctg acaaaagcct cctaatgtag
841 ccgcttcaga cgagagcagg cttttttctc tgaagtaccc agccaacatc gtctggcggt
901 gtctgactcc gtggtgttgg cggggacacg aaccaagcac agcttgattt ttatggttta
961 atgtaagaga tggagcctcc accactgtcg cttcagaaga ttgttgtttt gacgtctcag
1021 ccacacaaat ggagtgaaac tgccattata ggagataagc aggggagact gaggtgtcag
1081 gatttaggac cctgccttca aagcagatcc acctgttgcc cccacagttt gcgagtggct
1141 ccattgaaca caaagggact gatggttgaa tgcaggcggg ctgccgggtg cccccatctg
1201 aggacgtcta actgtgtccc ttctttgtct cccgtccctc cccactgtcc tcgctctgca
1261 ggaatggcat caccagctgc cggatgcgga ctgagagtga gccatcttgt ggctccccag
1321 tggtcagcgg agaccccaag gaggatcaca actacagcag tgccaagtcc tccaacgccc
1381 ggagcacctc gcccaccagc gactccatct cctcctcctc ctcctcagcc gacgaccact
1441 atgagtttgc caccaagggg agccaggagg gcagcgaggg cagcgagggg agcttccgga
1501 gccacgagag ccccagcgac acggaagagg acgacaggaa gcacagccag aaggagccca
1561 aggattctct gggggacagc gggtacgcat cccagcacaa gaagcgccag cacttcgcca
1621 aggccaggaa ggtccccagc gacacactgc ccctcaaaaa gagacgcacc gaaaagcccc
1681 ccgagagcga tgatgaggag atgaaagaag cggcagggtc cctcctgcac ttagcaggga
1741 tccggtcctg tttgaataac atcaccaatc ggacggcaaa ggggcagaaa gagcaaaagg
1801 aaaccacaaa aaattaaaaa caagtcactg atttgttttg aacttacgac catttggttt
1861 cagcatgtca ggagatttct aatgatttgt ggcaatatca gcaatttttt ttcttttttc
1921 ttgtttttgg tttggttttc tttcttttct tttcctttta ttttgtttta atttgccccc
1981 tcttctttgt tttggaccct taagaatttt atttttaaag gagattgaag ccatagaact
2041 catattgaca ctcagctgtt ttacaaaagc ttttcattat ctgaagacaa aaccgaaaaa
2101 gccaaaatta ccattgcttc ctccagcttg tcagaaacct gtggctgaat ccgcagggat
2161 gtcaacgtca atatcacagg aacacacatt cggcacctag aaggcacgtg ggcaaagtaa
2221 tcatcgttca ggcccaaccc ttaggtttaa aaagtcaggt tgtccatccc attgggttca
2281 ctgagtgaag gcacataaag caattgagga ggaggaggaa cccctcgtcc ccctaggagc
2341 agacccaagc ttgtggcacc aggcatctga tggtgccagg aaagccactg gaattgtcac
2401 acggcgagca cagagggccg gccaccagtc ctcgatgctt ctgaaccctg aagcccgatg
2461 acatcttacg aggtggacgt tggactgttc atgcgcatcg ggtgtcagtg actcatggag
2521 aagaaatggg gtaaattttt agtgatgttg ctaatcattg aattctgttc tctattaaat
2581 taagaaaatg ttccaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
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