LOCUS BC010122 2583 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens fem-1 homolog b (C. elegans), mRNA (cDNA clone
MGC:19792 IMAGE:3840453), complete cds.
ACCESSION BC010122
VERSION BC010122.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2583)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2583)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC010122.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: i Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52851431.
FEATURES Location/Qualifiers
source 1..2583
/db_xref="H-InvDB:HIT000034817"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19792 IMAGE:3840453"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2583
/gene="FEM1B"
/gene_synonym="FIAA"
/db_xref="GeneID:10116"
/db_xref="HGNC:HGNC:3649"
CDS 616..2499
/gene="FEM1B"
/gene_synonym="FIAA"
/codon_start=1
/product="fem-1 homolog b (C. elegans)"
/protein_id="AAH10122.1"
/db_xref="GeneID:10116"
/db_xref="HGNC:HGNC:3649"
/translation="MEGLAGYVYKAASEGKVLTLAALLLNRSESDIRYLLGYVSQQGG
QRSTPLIIAARNGHAKVVRLLLEHYRVQTQQTGTVRFDGYVIDGATALWCAAGAGHFE
VVKLLVSHGANVNHTTVTNSTPLRAACFDGRLDIVKYLVENNANISIANKYDNTCLMI
AAYKGHTDVVRYLLEQRADPNAKAHCGATALHFAAEAGHIDIVKELIKWRAAIVVNGH
GMTPLKVAAESCKADVVELLLSHADCDRRSRIEALELLGASFANDRENYDIIKTYHYL
YLAMLERFQDGDNILEKEVLPPIHAYGNRTECRNPQELESIRQDRDALHMEGLIVRER
ILGADNIDVSHPIIYRGAVYADNMEFEQCIKLWLHALHLRQKGNRNTHKDLLRFAQVF
SQMIHLNETVKAPDIECVLRCSVLEIEQSMNRVKNISDADVHNAMDNYECNLYTFLYL
VCISTKTQCSEEDQCKINKQIYNLIHLDPRTREGFTLLHLAVNSNTPVDDFHTNDVCS
FPNALVTKLLLDCGAEVNAVDNEGNSALHIIVQYNRPISDFLTLHSIIISLVEAGAHT
DMTNKQNKTPLDKSTTGVSEILLKTQMKMSLKCLAARAVRANDINYQDQIPRTLEEFV
GFH"
BASE COUNT 658 a 638 c 695 g 592 t
ORIGIN
1 cgctcttgcg ggagcgttcc gcatcgcccc gggggcccct acgcgaggat ctccggggcc
61 gttggcagcg cctggcactt ctgagctcgg cggacgagag cctgcaggtt tcctccagtc
121 agggacggcg aagggcggaa agcgcaggag gaggcagtgt taggccttag gccgggtggg
181 ccgggtcagg agagacgcgc ccatctttcg ccatccgggg tgcgcgaggt cctctcggga
241 cccggccggc gacccgtagc tcgggcacgc gcctgtcgca tcccgcagga aggaggggtc
301 cggcctgagg cccggggcgg cgtccgccat ggagatcccc tcggtccagg gccggcgcct
361 gggacctggc gggcggccct gaccgccttc ctccctgcgc gggctgggtc gcggacgtgc
421 ccttcgcggc actcggcctc ctctgcgtct ccgccttccc tgggccgcac tgctgcctgg
481 gcgcggcggc ggcgacggcg ccctgttgaa tgggctgtga gggcccaggt ttaaagcgct
541 ggcgaacgcg gcctccgggg gcgcacggca gctgcagcgg tggcgaccaa acgggtgttg
601 gagttggcgg cggccatgga gggcctggct ggctatgtat acaaggcggc cagcgagggc
661 aaggtgctga ctctggccgc cttgcttctc aaccggtctg aaagcgacat ccgctatctg
721 cttggctatg tcagccagca gggagggcag cgctccacgc ccctcatcat cgcagcccgc
781 aatggacacg caaaggtggt acgcttgctc ttagaacatt accgggtgca gactcagcag
841 actggcaccg tccgcttcga cgggtatgtc attgatggtg ccactgctct ttggtgtgca
901 gctggagcag gacattttga agttgttaaa cttctagtca gccatggagc caacgtgaac
961 cataccacag taactaattc aacccccctg cgggcagcat gctttgatgg cagactggac
1021 attgtgaaat acttggttga aaataatgcc aacatcagca ttgccaacaa atatgacaac
1081 acctgcctaa tgattgcggc atataaggga cacactgatg tggtcagata ccttttagaa
1141 caacgtgctg atcccaatgc caaagcacat tgtggagcca cagcattgca ctttgcagct
1201 gaagctgggc acatagatat tgtgaaagag ctgataaaat ggcgtgctgc tatagtagtg
1261 aatggccatg ggatgacgcc attgaaagta gctgccgaaa gctgtaaagc tgatgtcgta
1321 gaactgttac tctctcatgc tgattgcgac cgaagaagtc ggattgaagc tttggaactc
1381 ttgggtgcct cctttgcaaa tgaccgtgag aactatgaca tcataaagac ataccactat
1441 ctatatttag ccatgttaga gaggttccaa gatggtgata acattctcga aaaagaggtt
1501 cttccaccaa tccatgctta tgggaataga actgaatgta gaaatcctca ggaactggag
1561 tccattcggc aagacagaga tgctcttcat atggaaggcc ttatagttcg ggaacggatt
1621 ttaggtgctg acaatattga tgtttctcat cccatcattt acagaggagc tgtttatgcg
1681 gataatatgg aatttgagca gtgtatcaag ttgtggcttc atgccctgca cctcagacaa
1741 aaaggtaaca ggaacaccca caaggatctt cttcgatttg ctcaagtttt ctcacaaatg
1801 atacatttga atgaaactgt gaaggcccca gacatagaat gtgttttgag atgcagtgtt
1861 ttggaaatag aacaaagtat gaacagagtg aaaaatattt cagatgctga tgtccacaat
1921 gctatggaca attatgaatg taatctctat acctttctgt atttagtgtg catctctacc
1981 aaaacacagt gcagcgaaga agatcagtgc aaaattaaca agcagatcta caacctgatt
2041 caccttgatc ccagaactcg tgaaggtttc accttgctgc atctggctgt caactccaat
2101 actccagttg atgatttcca caccaatgac gtctgcagct ttccaaatgc acttgtcaca
2161 aagctcctgc tggactgtgg tgctgaggtg aatgccgtgg acaatgaggg aaacagtgcc
2221 cttcatatta tcgttcagta caacaggccc atcagtgatt ttttgacctt gcactccatc
2281 atcattagcc tagttgaagc cggagctcac actgacatga cgaataaaca gaataagact
2341 ccgctagaca aaagtacaac tggggtatct gaaatactgc ttaaaactca aatgaagatg
2401 agtctcaagt gcctggctgc ccgagcagtt cgggctaatg acattaacta ccaagaccag
2461 atccccagaa ctcttgaaga gtttgttgga tttcattaag tgactggata tgtaaagtcg
2521 tttaatgtgg tgctaaaaag taaaggactt ttaatcacaa aaaaaaaaaa aaaaaaaaaa
2581 aaa
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