LOCUS BC010115 2394 bp mRNA linear HUM 07-OCT-2003 DEFINITION Homo sapiens Friend leukemia virus integration 1, mRNA (cDNA clone MGC:19589 IMAGE:3635042), complete cds. ACCESSION BC010115 VERSION BC010115.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2394) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2394) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis M. Staudt, M.D., Ph.D. cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 27 Row: g Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 7110592. FEATURES Location/Qualifiers source 1..2394 /db_xref="H-InvDB:HIT000034811" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:19589 IMAGE:3635042" /tissue_type="Lymph, Burkitt lymphoma" /clone_lib="NIH_MGC_8" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2394 /gene="FLI1" /gene_synonym="EWSR2" /gene_synonym="SIC-1" /db_xref="GeneID:2313" /db_xref="MIM:193067" CDS 126..1484 /gene="FLI1" /gene_synonym="EWSR2" /gene_synonym="SIC-1" /codon_start=1 /product="FLI1 protein" /protein_id="AAH10115.1" /db_xref="GeneID:2313" /db_xref="MIM:193067" /translation="MDGTIKEALSVVSDDQSLFDSAYGAAAHLPKADMTASGSPDYGQ PHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVSKCSKLVGGGESNPMNY NSYMDEKNGPPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYSLMEIDTSFFQ NMDGKELCKMNKEDFLRATTLYNTEVLLSHLSYLRESSLLAYNTTSHTDQSSRLSVKE DPSYDSVRRGAWGNNMNSGLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANP GSGQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDK LSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPTESSMYKYPSDISYMPSYH AHQQKVNFVPPHPSSMPVTSSSFFGAASQYWTSPTGGIYPNPNVPRHPNTHVPSHLGS YY" misc_feature 465..719 /gene="FLI1" /gene_synonym="EWSR2" /gene_synonym="SIC-1" /note="SAM_PNT; Region: SAM / Pointed domain" /db_xref="CDD:smart00251" misc_feature 963..1214 /gene="FLI1" /gene_synonym="EWSR2" /gene_synonym="SIC-1" /note="Ets; Region: Ets-domain" /db_xref="CDD:pfam00178" BASE COUNT 669 a 609 c 574 g 542 t ORIGIN 1 ggcacgaggg gagggcccag ggcgccaggg aggccgcgcc gggctaatcc gaaggggctg 61 cgaggtcagg ctgtaaccgg gtcaatgtgt ggaatattgg ggggctcggc tgcagacttg 121 gccaaatgga cgggactatt aaggaggctc tgtcggtggt gagcgacgac cagtccctct 181 ttgactcagc gtacggagcg gcagcccatc tccccaaggc cgacatgact gcctcgggga 241 gtcctgacta cgggcagccc cacaagatca accccctccc accacagcag gagtggatca 301 atcagccagt gagggtcaac gtcaagcggg agtatgacca catgaatgga tccagggagt 361 ctccggtgga ctgcagcgtt agcaaatgca gcaagctggt gggcggaggc gagtccaacc 421 ccatgaacta caacagctat atggacgaga agaatggccc ccctcctccc aacatgacca 481 ccaacgagag gagagtcatc gtccccgcag accccacact gtggacacag gagcatgtga 541 ggcaatggct ggagtgggcc ataaaggagt acagcttgat ggagatcgac acatcctttt 601 tccagaacat ggatggcaag gaactgtgta aaatgaacaa ggaggacttc ctccgcgcca 661 ccaccctcta caacacggaa gtgctgttgt cacacctcag ttacctcagg gaaagttcac 721 tgctggccta taatacaacc tcccacaccg accaatcctc acgattgagt gtcaaagaag 781 acccttctta tgactcagtc agaagaggag cttggggcaa taacatgaat tctggcctca 841 acaaaagtcc tccccttgga ggggcacaaa cgatcagtaa gaatacagag caacggcccc 901 agccagatcc gtatcagatc ctgggcccga ccagcagtcg cctagccaac cctggaagcg 961 ggcagatcca gctgtggcaa ttcctcctgg agctgctctc cgacagcgcc aacgccagct 1021 gtatcacctg ggaggggacc aacggggagt tcaaaatgac ggaccccgat gaggtggcca 1081 ggcgctgggg cgagcggaaa agcaagccca acatgaatta cgacaagctg agccgggccc 1141 tccgttatta ctatgataaa aacattatga ccaaagtgca cggcaaaaga tatgcttaca 1201 aatttgactt ccacggcatt gcccaggctc tgcagccaca tccgaccgag tcgtccatgt 1261 acaagtaccc ttctgacatc tcctacatgc cttcctacca tgcccaccag cagaaggtga 1321 actttgtccc tccccatcca tcctccatgc ctgtcacttc ctccagcttc tttggagccg 1381 catcacaata ctggacctcc cccacggggg gaatctaccc caaccccaac gtcccccgcc 1441 atcctaacac ccacgtgcct tcacacttag gcagctacta ctagaagctt actcatcagt 1501 ggccttctag ctgaagccca tcctgcacac ttactggatg ctttggactc aacaggacat 1561 atgtggcctt gaagggaaga caaaactgga tgttctttct tgttggatag aacctttgta 1621 tttgttcttt aaaaacattt tttttaatgt tggtaacttt tgcttcctct acctgaacaa 1681 agagatgaat aattccatgg gccagtatgc cagtttgaat tctcagtctc ctagcatctt 1741 gtgagttgca tattaagatt actggaatgg ttaagtcatg gttctgagaa agaagctgta 1801 cgttttcttt atgtttttat gaccaaagca gtttcttgtc aatacacggg gttcagtatg 1861 acacagaatc atggacttaa cccgtcatgt tctggtttga gatttagtga caaatagagg 1921 tgggaagctt ataatctaat tttaggagga ccaaattcag tggatggcaa ctggaacatt 1981 gattgtaagg ccagtgaagt tttcacccaa ctggaatttg atggaaagaa ggtttgtgtg 2041 tttaagacgc caagggcatt gcagaatccc tctcagtgga cagtatgcac tcagctgacc 2101 actctctcta gaaatagtca agatatgaac taagaaattt taatgcaaat acatacattc 2161 ctgaaagacg gggaattaaa ttactaattt tttttttttt taaatgatga cagtggtccc 2221 agaacttgga aaagttgtag ggatttctaa actcaagcag attcgcaagt gctgtgcgct 2281 tgtcagacca tcagaccagg gccaaccaat cagaaggcaa cttactgtat aaattatgca 2341 gagttatttt cctatatctc acagtattaa aaaaaaaaaa aaaaaaaaaa aaaa //