LOCUS BC010110 1263 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens SH3 domain containing 19, mRNA (cDNA clone
IMAGE:3628835), partial cds.
ACCESSION BC010110
VERSION BC010110.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1263)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1263)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC010110.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: g Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 57222241.
FEATURES Location/Qualifiers
source 1..1263
/db_xref="H-InvDB:HIT000087442"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3628835"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1263
/gene="SH3D19"
/gene_synonym="EBP"
/gene_synonym="EVE1"
/gene_synonym="Kryn"
/gene_synonym="SH3P19"
/db_xref="GeneID:152503"
/db_xref="HGNC:HGNC:30418"
/db_xref="MIM:608674"
CDS 463..>1263
/gene="SH3D19"
/gene_synonym="EBP"
/gene_synonym="EVE1"
/gene_synonym="Kryn"
/gene_synonym="SH3P19"
/codon_start=1
/product="SH3D19 protein"
/protein_id="AAH10110.1"
/db_xref="GeneID:152503"
/db_xref="HGNC:HGNC:30418"
/db_xref="MIM:608674"
/translation="MDLQKKQSNLATGLSKAKSQVFKNQDPVLPPRPKPGHPLYSKYM
RGDVLVMLKQTENNYLECQKGEDTGRVHLSQMKIITPLDEHLRSRPNDPSHAQKPVDS
GAPHAVVLHDFPAEQVDDLNLTSGEIVYLLEKIDTDWYRGNCRNQIGIFPANYVKVII
DIPEGGNGKRECVSSHCVKGSRCVARFEYIGEQKDELSFSEGEIIILKEYVNEEWARG
EVRGRTGIFPLNFVEPVEDYPTSGANVLSTKVPLKTKKKKKKKKKKKKK"
BASE COUNT 406 a 277 c 280 g 300 t
ORIGIN
1 gtcactggga gaagggcccc cagccaaccc cccagttcca gttctgcaga gcaagccctt
61 ggtggacatc gatctctcag ctttgatgat gatgttttgc ccaccccatc ggggaacctg
121 gctgaagaat ctgttggttc agagatggtt ctaggtttac atgaggatcc acaaagtcca
181 cctcctctcc ctgctgaaaa acctattgga aacactttca gtacagtatc tggaaagctc
241 agtaatgttg agagaactag aaacttggaa tccaaccacc caggtcaaac aggaggtttt
301 gtgcgagtac ccccaaggtt gccaccgaga cctgtgaatg gaaaaaccat tccaactcaa
361 cagcctccaa ccaaggtgcc ccctgagaga ccacctcccc caaagctttc tgcaaccaga
421 agatctaata agaaactgcc ttttaatcga tcctcttctg acatggatct tcagaaaaaa
481 caaagtaact tggcaactgg actctcaaaa gccaagagtc aagtttttaa aaatcaagat
541 ccggtgctac cccctcgtcc caaaccagga caccctctct acagtaaata catgcgtggg
601 gatgtacttg tgatgctgaa gcagacggaa aataattact tggagtgcca aaagggagaa
661 gacactggca gagttcacct gtctcaaatg aagattatca ctccacttga tgaacatctt
721 agaagcagac caaacgatcc aagccacgct cagaagcctg ttgacagtgg tgctcctcat
781 gctgtcgttc ttcatgattt cccagcagag caagttgatg atttgaacct cacttctgga
841 gaaattgttt atcttctgga gaagatagat acagattggt acagagggaa ctgtagaaac
901 cagattggca tatttcctgc caactatgtc aaagtgatta ttgatatccc agaaggagga
961 aatgggaaaa gagaatgtgt ttcatctcat tgtgttaaag gctcaagatg tgttgctcgg
1021 tttgaatata ttggagagca gaaggatgag ttgagtttct cagagggaga aattattatt
1081 cttaaagagt atgtgaatga ggaatgggcc agaggagaag ttcgaggcag aactgggatt
1141 ttccccctga actttgtgga gcctgttgag gattatccca cctctggtgc aaatgtttta
1201 agcacaaagg taccactgaa aaccaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1261 aaa
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