LOCUS BC010066 2334 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquilin 1, mRNA (cDNA clone MGC:19622
IMAGE:4110398), complete cds.
ACCESSION BC010066
VERSION BC010066.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2334)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2334)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC010066.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: m Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16753204.
FEATURES Location/Qualifiers
source 1..2334
/db_xref="H-InvDB:HIT000050528"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19622 IMAGE:4110398"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2334
/gene="UBQLN1"
/gene_synonym="DA41"
/gene_synonym="DSK2"
/gene_synonym="PLIC-1"
/gene_synonym="XDRP1"
/db_xref="GeneID:29979"
/db_xref="HGNC:HGNC:12508"
/db_xref="MIM:605046"
CDS 255..1940
/gene="UBQLN1"
/gene_synonym="DA41"
/gene_synonym="DSK2"
/gene_synonym="PLIC-1"
/gene_synonym="XDRP1"
/codon_start=1
/product="ubiquilin 1"
/protein_id="AAH10066.1"
/db_xref="GeneID:29979"
/db_xref="HGNC:HGNC:12508"
/db_xref="MIM:605046"
/translation="MAESGESGGPPGSQDSAAGAEGAGAPAAAASAEPKIMKVTVKTP
KEKEEFAVPENSSVQQFKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDGLTV
HLVIKTQNRPQDHSAQQTNTAGSNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSS
LGLNTTNFSELQSQMQRQLLSNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQL
IQRNPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMY
TDIQEPMLSAAQEQFGGNPFASLVSNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSA
SSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQITENPQLMQ
NMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAP
GLIPGFTPGLGALGSTGGSSGTNGSNATPSENTSPTAGTTEPGHQQFIQQMLQALAGV
NPQLQNPEVRFQQQLEQLSAMGFLNREANLQALIATGGDINAAIERLLGSQPS"
BASE COUNT 665 a 562 c 535 g 572 t
ORIGIN
1 cggatgtcgg tgtgagcgag cggcgcctga acacacggcg gctgccgagc gcctgacccg
61 ggcctgcgcc agagcctgca ccgagctccg gggccccaca cccgctacgg tggccctgcg
121 cccgttgcta ctgaggcggc gtgctctgca ttcttcgctg tccaggcctg ccggctctgg
181 tgtctgctgg ctcctccttg ctcgcctgct ccctcctgct tgcctgagtc accgccgccg
241 ccgccgccac agccatggcc gagagtggtg aaagcggcgg tcctccgggc tcccaggata
301 gcgccgccgg agccgaaggt gctggcgccc ccgcggccgc tgcctccgcg gagcccaaaa
361 tcatgaaagt caccgtgaag accccgaagg aaaaggagga attcgccgtg cccgagaata
421 gctccgtcca gcagtttaag gaagaaatct ctaaacgttt taaatcacat actgaccaac
481 ttgtgttgat atttgctgga aaaattttga aagatcaaga taccttgagt cagcatggaa
541 ttcatgatgg acttactgtt caccttgtca ttaaaacaca aaacaggcct caggatcatt
601 cagctcagca aacaaataca gctggaagca atgttactac atcatcaact cctaatagta
661 actctacatc tggttctgct actagcaacc cttttggttt aggtggcctt gggggacttg
721 caggtctgag tagcttgggt ttgaatacta ccaacttctc tgaactacag agtcagatgc
781 agcgacaact tttgtctaac cctgaaatga tggtccagat catggaaaat ccctttgttc
841 agagcatgct ctcaaatcct gacctgatga gacagttaat tatggccaat ccacaaatgc
901 agcagttgat acagagaaat ccagaaatta gtcatatgtt gaataatcca gatataatga
961 gacaaacgtt ggaacttgcc aggaatccag caatgatgca ggagatgatg aggaaccagg
1021 accgagcttt gagcaaccta gaaagcatcc cagggggata taatgcttta aggcgcatgt
1081 acacagatat tcaggaacca atgctgagtg ctgcacaaga gcagtttggt ggtaatccat
1141 ttgcttcctt ggtgagcaat acatcctctg gtgaaggtag tcaaccttcc cgtacagaaa
1201 atagagatcc actacccaat ccatgggctc cacagacttc ccagagttca tcagcttcca
1261 gcggcactgc cagcactgtg ggtggcacta ctggtagtac tgccagtggc acttctgggc
1321 agagtactac tgcgccaaat ttggtgcctg gagtaggagc tagtatgttc aacacaccag
1381 gaatgcagag cttgttgcaa caaataactg aaaacccaca actgatgcaa aacatgttgt
1441 ctgcccccta catgagaagc atgatgcagt cactaagcca gaatcctgac cttgctgcac
1501 agatgcagaa tcctgataca ctatcagcaa tgtcaaaccc tagagcaatg caggccttgt
1561 tacagattca gcagggttta cagacattag caacggaagc cccgggcctc atcccagggt
1621 ttactcctgg cttgggggca ttaggaagca ctggaggctc ttcgggaact aatggatcta
1681 acgccacacc tagtgaaaac acaagtccca cagcaggaac cactgaacct ggacatcagc
1741 agtttattca gcagatgctg caggctcttg ctggagtaaa tcctcagcta cagaatccag
1801 aagtcagatt tcagcaacaa ctggaacaac tcagtgcaat gggatttttg aaccgtgaag
1861 caaacttgca agctctaata gcaacaggag gtgatatcaa tgcagctatt gaaaggttac
1921 tgggctccca gccatcatag cagcatttct gtatcttgaa aaaatgtaat ttatttttga
1981 taacggctct taaactttaa aatacctgct ttatttcatt ttgactcttg gaattctgtg
2041 ctgttataaa caaacccaat atgatgcatt ttaaggtgga gtacagtaag atgtgtgggt
2101 ttttctgtat ttttcttttc tggaacagtg ggaattaagg ctactgcatg catcacttct
2161 gcatttattg taatttttta aaaacatcac cttttatagt tgggtgacca gattttgtcc
2221 tgcatctgtc cagtttattt gctttttaaa cattagccta tggtagtaat ttatgtagaa
2281 taaaagcatt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
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