LOCUS BC010065 2630 bp mRNA linear HUM 04-OCT-2003
DEFINITION Homo sapiens adaptor-related protein complex 3, delta 1 subunit,
mRNA (cDNA clone MGC:19566 IMAGE:4106961), complete cds.
ACCESSION BC010065
VERSION BC010065.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2630)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2630)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC010065.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: m Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20127437.
FEATURES Location/Qualifiers
source 1..2630
/db_xref="H-InvDB:HIT000034775"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19566 IMAGE:4106961"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2630
/gene="AP3D1"
/gene_synonym="ADTD"
/db_xref="GeneID:8943"
/db_xref="MIM:607246"
CDS 203..2431
/gene="AP3D1"
/gene_synonym="ADTD"
/codon_start=1
/product="AP3D1 protein"
/protein_id="AAH10065.1"
/db_xref="GeneID:8943"
/db_xref="MIM:607246"
/translation="MALKMVKGSIDRMFDKNLQDLVRGIRNHKEDEAKYISQCIDEIK
QELKQDNIAVKANAVCKLTYLQMLGYDISWAAFNIIEVMSASKFTFKRIGYLAASQSF
HEGTDVIMLTTNQIRKDLSSPSQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKP
YIRKKAVLIMYKVFLKYPESLRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNY
LSLAPLFFKLMTSSTNNWVLIKIIKLFGALTPLGPRLGKKLIEPLTNLIHSTSAMSLL
YECVNTVIAVLISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTH
PKSVQSHKDLILQCLDDKDESIRLRALDLLYGMVSKKNLMEIVKKLMTHVDKAEGTTY
RDELLTKIIDICSQSNYQYITNFEWYISILVELTRLEGTRHGHLIAAQMLDVAIRVKA
IRKFAVSQMSALLDSAHLLASSTQRNGICEVLYAAAWICGEFSEHLQEPHHTLEAMLR
PRVTTLPGHIQAVYVQNVVKLYASILQQKEQAGEAEGAQAVTQLMVDRLPQFVQSADL
EVQERASCILQLVKHIQKLQAKDVPVAEEVSALFAGELNPVAPKAQKKVPVPEGLDLD
AWINEPLSDSESEDERPRAVFHEEEQRRPKHRPSEADEEELARRREARKQEQANNPFY
IKSSPSPQKRYQDTPGVEHIPVVQIDLSVPLKVPGLPMSDQYVKLEEERRHRQKLEKD
KR"
misc_feature 293..1945
/gene="AP3D1"
/gene_synonym="ADTD"
/note="Adaptin_N; Region: Adaptin N terminal region. This
family consists of the N terminal region of various alpha,
beta and gamma subunits of the AP-1, AP-2 and AP-3 adaptor
protein complexes. The adaptor protein (AP) complexes are
involved in the formation of clathrin-coated pits and
vesicles. The N-terminal region of the various adaptor
proteins (APs) is constant by comparison to the C-terminal
which is variable within members of the AP-2 family"
/db_xref="CDD:pfam01602"
BASE COUNT 600 a 820 c 761 g 449 t
ORIGIN
1 cccggagcgg gatcgcggca cctgccgagc gggtcgccgc ctctgccgcg gtccttggac
61 cccgccgccg ccctggcctg ggagcttgcc ccgccgcagc ggccggcagc gcggcgctcc
121 gcgggcggca ggcacgggcc ccgggccccc tcacggcgcc cagccgcggg cctcccgagg
181 caaaagcccg tgggccgccg cgatggccct caagatggtg aagggcagca tcgaccgcat
241 gttcgacaag aatctgcagg acttggtccg cggcatccgt aaccacaagg aggacgaggc
301 aaaatacata tctcagtgca ttgatgagat caagcaggag ctgaagcagg acaacatagc
361 ggtgaaggcg aacgcggtct gcaagctgac gtatttacag atgttgggat acgacatcag
421 ctgggccgcc ttcaacatca tagaagtgat gagtgcctcc aagttcacct tcaagcgaat
481 tggctacctc gctgcttccc agagctttca cgaaggcacc gacgtcatca tgctgaccac
541 caatcagatc cgtaaggact tgagcagccc cagccagtac gacacaggtg ttgcactgac
601 gggtctgtcc tgcttcgtca ccccagacct tgccagagac ctggcaaatg acatcatgac
661 actgatgtca cacaccaagc cctacatcag gaagaaggct gtgctgatca tgtacaaggt
721 gttcctgaag taccccgagt cgctgcgccc tgcctttccc cggctgaagg agaagctgga
781 ggaccccgac cccggggttc agtcggctgc cgtcaatgtc atctgcgagc tggccagacg
841 caaccctaag aactacctgt ccctggcccc gctctttttc aagctgatga cgtcctccac
901 caacaactgg gtcctcatca agatcatcaa gctgttcggt gctcttactc ctttgggacc
961 gcggctgggc aagaagctga tcgagcccct caccaatctc atccacagca cgtctgccat
1021 gtctctcctc tatgaatgtg tgaacaccgt gattgcagtg ctcatctcgc tgtcctccgg
1081 catgcccaac cacagcgcca gcatccagct ttgtgttcag aaattaagga tattgatcga
1141 ggactccgat cagaacttga agtacctggg gctgctggca atgtccaaga tcctgaagac
1201 ccaccccaag tccgtgcagt cccacaagga cctcatcctg cagtgcctgg acgacaagga
1261 cgagtccatc cggctgcggg ccctggacct gctctatggg atggtgtcca agaagaacct
1321 gatggagatc gtgaagaagc tgatgaccca cgtagacaag gcagagggta ccacctaccg
1381 tgacgagctg ctcaccaaga tcattgacat ctgcagccag tccaactacc agtacatcac
1441 caacttcgag tggtacatca gcatcctggt ggagctgacc cggctggagg gcacacggca
1501 cggccacctc atcgccgccc aaatgctgga cgtggccatc cgcgtgaagg ccatccgcaa
1561 gttcgccgtg tcccagatgt ctgcgctgct tgacagtgca cacctgctgg ccagcagcac
1621 ccagcggaac gggatctgtg aggtgctgta cgctgccgcc tggatctgcg gggagttctc
1681 agagcatctg caggaaccac accacacttt ggaggccatg ctgcggccca gagtcaccac
1741 gctgccaggc cacatccagg ccgtgtatgt gcagaacgtg gtcaagctct acgcctccat
1801 cctgcagcag aaggagcagg ccggggaggc agagggcgct caggccgtca cccagctcat
1861 ggtggaccgg ctgccccagt ttgtgcagag cgcagacctg gaggtgcagg agcgggcgtc
1921 ctgcatcctg cagctggtca agcacatcca gaagcttcag gccaaggacg tgcctgtggc
1981 agaggaggtc agcgctctct ttgctgggga gctgaaccca gtggccccca aggcccagaa
2041 gaaggttcca gtccccgaag gcctggacct ggacgcctgg atcaatgagc cactctcgga
2101 cagcgagtca gaggacgaga ggcccagggc cgtcttccac gaggaggagc agcggcgtcc
2161 caagcaccgg ccgtcggagg cggacgagga agagctggct cggcgccgag aggcccggaa
2221 gcaggagcag gccaacaacc ccttctacat caagagctcg ccatcgccac agaagcggta
2281 ccaggacacc ccgggcgtgg agcacattcc cgtggtgcag attgacctct ccgtcccctt
2341 gaaggttcca gggctgccta tgtcagatca gtatgtgaag ctggaggagg agcggcggca
2401 ccggcagaag ctggagaagg acaagagatg aaggcgacgc tggccaagtg ttgagagctg
2461 cctgcgagcc ccgcaccacc ccgcggagca cgtacccagg gaccgcagcc ctgacgtgtc
2521 tcgcctctcc tcagtcgtgt gtactgtacc caagcctgag tgttaattta actctatgtt
2581 gtccgccgtg taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//