LOCUS BC010056 1657 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens melanoma antigen family F, 1, mRNA (cDNA clone
MGC:19617 IMAGE:3943384), complete cds.
ACCESSION BC010056
VERSION BC010056.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1657)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1657)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC010056.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: k Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58530878.
FEATURES Location/Qualifiers
source 1..1657
/db_xref="H-InvDB:HIT000034770"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19617 IMAGE:3943384"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1657
/gene="MAGEF1"
/gene_synonym="MGC19617"
/db_xref="GeneID:64110"
/db_xref="HGNC:HGNC:29639"
/db_xref="MIM:609267"
CDS 182..1108
/gene="MAGEF1"
/gene_synonym="MGC19617"
/codon_start=1
/product="melanoma antigen family F, 1"
/protein_id="AAH10056.1"
/db_xref="GeneID:64110"
/db_xref="HGNC:HGNC:29639"
/db_xref="MIM:609267"
/translation="MLQTPESRGLPVPQAEGEKDGGHDGETRAPTASQERPKEELGAG
REEGAAEPALTRKGARALAAKSLARRRAYRRLNRTVAELVQFLLVKDKKKSPITRSEM
VKYVIGDLKILFPDIIARAAEHLRYVFGFELKQFDRKHHTYILINKLKPLEEEEEEED
LGGDGPRLGLLMMILGLIYMRGNSAREAQVWEMLRRLGVQPSKYHFLFGYPKRLIMED
FVQQRYLSYRRVPHTNPPAYEFSWGPRSNLEISKMEVLGFVAKLHKKEPQHWPVQYRE
ALADEADRARAKARAEASMRARASARAGIHLW"
BASE COUNT 409 a 381 c 487 g 380 t
ORIGIN
1 gcgttgcggc cgcaggtttg actcccgtgc ggtgcggccc agcagccaca aagctcccgc
61 tgccattgct ccctgtactc ccgccgtcac tgccgctgtc caacccctcc cccggggctt
121 gcgcggcggc tcccacaccc ctcggcccgt gtacgcgctc tgcacctgcc tgcccgaaaa
181 catgttgcag acaccagaga gcagggggct cccggtcccg caggccgagg gggagaagga
241 tggcggccat gatggtgaga cccgggcccc gaccgcctcg caggagcgcc ccaaggagga
301 gcttggcgcc gggagggagg agggggctgc ggagcccgcc ctcacccgga aaggcgcgag
361 ggccttggcg gccaaatcct tggcaaggcg cagggcctac cgccggctga atcggacggt
421 ggcggagttg gtgcagttcc tcctggtgaa agacaagaag aagagtccca tcacacgctc
481 ggagatggtg aaatacgtta ttggagactt gaagattctg ttcccggaca tcatcgcaag
541 ggccgcagag catctgcggt atgtctttgg ttttgagctg aaacagtttg accgcaagca
601 ccacacttac atcctgatca acaaactaaa acctctggag gaggaggagg aggaggagga
661 tctgggagga gatggcccca gattgggtct gttaatgatg atcctgggcc ttatctatat
721 gagaggtaat agcgccaggg aggcccaggt ctgggagatg ctgcgtcggt tgggggtgca
781 accctcaaag tatcatttcc tctttgggta tccgaagagg cttattatgg aagattttgt
841 gcagcagcga tatctcagtt acaggcgggt gcctcacacc aatccaccag catatgaatt
901 ctcttggggt ccccgaagca acctggaaat cagcaagatg gaagtcctgg ggttcgtggc
961 caaactgcat aagaaggaac cgcagcactg gccagtgcag taccgtgagg ccctagcaga
1021 cgaggccgac agggccagag ccaaggccag agctgaagcc agtatgaggg ccagggccag
1081 tgctagggcc ggcatccacc tctggtgagg gttggtgaaa agttggccag tgggtccccg
1141 tgaggacgaa ctactgtcct gagtcataag taatatgggt ggggcgaggg tcttatttct
1201 gtagaaatcg tgtgacttta aggatttaga ttttgtatct tatgttttgt aacatttaat
1261 aattactgtt aaaatgctgt ttgtaaatga gattggtcta ctttttcctg taggatttta
1321 ttgtagagtt ttgctggttt tgtaaaatgg atggaagaac tttgtattta tactgtgatt
1381 ttgaacagat tatgcaacat tggaaggaag gctgtacttt gatggtttga aggaactcag
1441 cagtatgatg atctggttcc aggggaaaaa aatagctggt tggtgtctag ccccccaaca
1501 cttttgtctg ttgtgtataa aagaagaaag actggcatgt accttcattt gcttagctat
1561 ttgagtatct agagaaaaat taaaatgcaa tgagttagca gtataccctg gcacacttaa
1621 taaattaaac atttgtggaa aaaaaaaaaa aaaaaaa
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