LOCUS BC010049 3225 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens non-POU domain containing, octamer-binding, mRNA (cDNA
clone IMAGE:3833574), with apparent retained intron.
ACCESSION BC010049
VERSION BC010049.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3225)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3225)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC010049.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: i Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3225
/db_xref="H-InvDB:HIT000034765"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3833574"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 851 a 727 c 772 g 875 t
ORIGIN
1 ctctaaaggt ggggaagctg gagaataata gatgtgcaaa aataggcagt ggaaataatt
61 ctcagatgat gtgttccttg aaagcttgat gaaacagaac cacaaaaatg gcacatttta
121 atttttcctc ataagttttg tttcaaggat aacaagtttt ttgcctagga tactggagct
181 aaagtatgcc ctttggaact tttttttttt ttttgagacg gagtatcact cttgtggccc
241 aggctggcgt gcagtggcat ggtctcggct cactgcagcc tccacctccc gggttcaggt
301 gattctcctg cctcagcctc ctgagtagct gggattacag gtgtctgtca ccacacccgg
361 ctaatttttg tatttttggt agagacgggg tttcactgtt ttggccaggc tggtctcgag
421 ctcctgacct caggagatcc acccaccttg gcctcccaaa gtattggggt tacagatgtg
481 agccactgca cctggctgga acttttttgt tttaattagg aaatttcaaa catatagaag
541 tagacagaat aataatgaac ctgcacatat gcattgcata gcttcagtaa ttatcaagtt
601 gtggttaatt ttgttttatc tgtacccttt ccctattttg tccccccatg atcaagagat
661 gggtatctca ccatgttgcc ttggctagac ttgaattcct gagcttaagc aattctctgt
721 cctcagcctc ctgagtagct gggacaaagg caacgcacca cggtgcctgg tttatttgta
781 tctttaaaaa actattttaa attgaattaa ccaggcatgg tatacgtctg tagtctaact
841 actcaactag gctaagctga tagggctgat tgagcctagg agtttgaggt tgcagtgagc
901 tatgctcatg gcactgcact tcagcctggg tgatagagtg agacccagtc tcttaaaaaa
961 aaactaatga tggtaaaaca tacataacat aaaatttact atcttaaccg tttgtaagtg
1021 tagacattat tttaaaatct gcttcctagg aaacccgaac cctagcggag attgccaaag
1081 tggagctgga caatatgcca ctccgtggaa agcagctgcg tgtgcgcttt gcctgccata
1141 gtgcatccct tacagttcga aaccttcctc agtatgtgtc caacgaactg ctggaagaag
1201 ccttttctgt gtttggccag gtagagaggg ctgtagtcat tgtggatgat cgaggaaggc
1261 cctcaggaaa aggcattgtt gagttctcag ggaagccagc tgctcggaaa gctctggaca
1321 gatgcagtga aggctccttc ctgctaacca catttcctcg tcctgtgact gtggagccca
1381 tggaccagtt agatgatgaa gagggacttc cagagaagct ggttataaaa aaccagcaat
1441 ttcacaagga acgagagcag ccacccagat ttgcacagcc tggctccttt gagtatgaat
1501 atgccatgcg ctggaaggca ctcattgaga tggagaagca gcagcaggac caagtggacc
1561 gcaacatcaa ggaggctcgt gagaagctgg agatggagat ggaagctgca cgccatgagc
1621 accaggtcat gctaatgaga caggatttga tgaggcgcca agaagaactt cggaggatgg
1681 aagagctgca caaccaagag gtgcaaaaac gaaagcaact ggagctcagg caggaggaag
1741 agcgcaggcg ccgtgaagaa gagatgcggc ggcagcaaga agaaatgatg cggcgacagc
1801 aggaaggatt caagggaacc ttccctgatg cgagagagca ggagattcgg atgggtcaga
1861 tggctatggg aggtgctatg ggcataaaca acagaggtgc catgccccct gctcctgtgc
1921 cagctggtac cccagctcct ccaggacctg ccactatgat gccggatgga actttgggat
1981 tgaccccacc aacaactgaa cgctttggtc aggctgctac aatggaagga attggggcaa
2041 ttggtggaac tcctcctgca ttcaaccgtg cagctcctgg agctgaattt gccccaaaca
2101 aacgtcgccg atactaataa gttgcagtgt ctagtttctc aaaaccctta aaagaaggac
2161 cctttttgga ctagccagaa ttctaccctg gaaaagtgtt agggattcct tccaatagtt
2221 agatctaccc tgcctgtact actctaggga gtatgctgga ggcagagggc aagggagggg
2281 tggtattaaa caagtcaatt ctgtgtggta tattgtttaa tcagttctgt gtggtgcatt
2341 cctgaagtct ctaatgtgac tgttgagggc ctggggaaac catggcaaag tggatccagt
2401 tagagcccat taatcttgat cattccggtt tttttttttt ttgtccatct tgtttcattt
2461 gcttgccccg cccccgagac ggagtcttac tctgtcgccc aggctggagt gtagtggcat
2521 gatctcggct cactgcaatc tctgcctccc gggttcaagc ttgtccaggt tgatcttgaa
2581 ctcctgacct cgtgatctac ccacctcggc ctcccaaaat gctgggatta caggggtgag
2641 ccaccgtgcc caacctcact tgcttcttat ccttacactc ccccagcccc agagaaactg
2701 ccacatacac cacaaaaacc aaacatcccc caatgacctt agccccattg ctccattcac
2761 tcccaggtga gaattcaggc aaacgtccac aaaggtcaca ggcagcgtac atacggatct
2821 gttatacccc atatattacc ccttcatgtc ctaaagaaga cattttctct tagagatttt
2881 cattttagtg tatctttaaa aaaaaatctt gtgttaactt gcctccatct ttttcttggg
2941 tgaggacacc caggaatgac ccttttgtgt ctatgatgtt gctgttcaca gcttttcttg
3001 ataggcctag tacaatcttg ggaacagggt tactgtatac tgaaggtctg acagtagctc
3061 ttagactcgc ctatcttagg tagtcatgct gtgcattttt tttttcattg gtgtactgtg
3121 tttgatttgt ctcatatatt tggagttttt ctgaaaaatg gagcagtaat gcagcatcaa
3181 cctattaaaa tacattttaa gccttttaaa aaaaaaaaaa aaaaa
//