LOCUS BC009957 1832 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CDK5 regulatory subunit associated protein 3, mRNA
(cDNA clone MGC:14989 IMAGE:4130677), complete cds.
ACCESSION BC009957
VERSION BC009957.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1832)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1832)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC009957.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: k Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28872791.
FEATURES Location/Qualifiers
source 1..1832
/db_xref="H-InvDB:HIT000034692"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14989 IMAGE:4130677"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1832
/gene="CDK5RAP3"
/gene_synonym="C53"
/gene_synonym="HSF-27"
/gene_synonym="IC53"
/gene_synonym="MST016"
/gene_synonym="OK/SW-cl.114"
/db_xref="GeneID:80279"
/db_xref="HGNC:HGNC:18673"
/db_xref="MIM:608202"
CDS 6..1526
/gene="CDK5RAP3"
/gene_synonym="C53"
/gene_synonym="HSF-27"
/gene_synonym="IC53"
/gene_synonym="MST016"
/gene_synonym="OK/SW-cl.114"
/codon_start=1
/product="CDK5 regulatory subunit associated protein 3"
/protein_id="AAH09957.1"
/db_xref="GeneID:80279"
/db_xref="HGNC:HGNC:18673"
/db_xref="MIM:608202"
/translation="MEDHQHVPIDIQTSKLLDWLVDRRHCSLKWQSLVLTIREKINAA
IQDMPESEEIAQLLSGSYIHYFHCLRILDLLKGTEASTKNIFGRYSSQRMKDWQEIIA
LYEKDNTYLVELSSLLVRNVNYEIPSLKKQIAKCQQLQQEYSRKEEECQAGAAEMREQ
FYHSCKQYGITGENVRGELLALVKDLPSQLAEIGAAAQQSLGEAIDVYQASVGFVCES
PTEQVLPMLRFVQKRGNSTVYEWRTGTEPSVVERPHLEELPEQVAEDAIDWGDFGVEA
VSEGTDSGISAEAAGIDWGIFPESDSKDPGGDGIDWGDDAVALQITVLEAGTQAPEGV
ARGPDALTLLEYTETRNQFLDELMELEIFLAQRAVELSEEADVLSVSQFQLAPAILQG
QTKEKMVTMVSVLEDLIGKLTSLQLQHLFMILASPRYVDRVTEFLQQKLKQSQLLALK
KELMVQKQQEALEEQAALEPKLDLLLEKTKELQKLIEADISKRYSGRPVNLMGTSL"
BASE COUNT 480 a 434 c 551 g 367 t
ORIGIN
1 gaaagatgga ggaccatcag cacgtgccca tcgacatcca gaccagcaag ctgctcgatt
61 ggctggtgga cagaaggcac tgcagcctga aatggcagag tctggtgctg acgatccgcg
121 agaagatcaa tgctgccatc caggacatgc cagagagcga agagatcgcc cagctgctgt
181 ctgggtccta cattcactac tttcactgcc taagaatcct ggaccttctc aaaggcacag
241 aggcctccac gaagaatatt tttggccgat actcttcaca gcggatgaag gattggcagg
301 agattatagc tctgtatgag aaggacaaca cctacttagt ggaactctct agcctcctgg
361 ttcggaatgt caactatgag atcccctcac tgaagaagca gattgccaag tgccagcagc
421 tgcagcaaga atacagccgc aaggaggagg agtgccaggc aggggctgcc gagatgcggg
481 agcagttcta ccactcctgc aagcagtatg gcatcacggg cgaaaatgtc cgaggagaac
541 tgctggccct ggtgaaggac ctgccgagtc agctggctga gattggggca gcggctcagc
601 agtccctggg ggaagccatt gacgtgtacc aggcgtctgt ggggtttgtg tgtgagagcc
661 ccacagagca ggtgttgcca atgctgcggt tcgtgcagaa gcggggaaac tcaacggtgt
721 acgagtggag gacagggaca gagccctctg tggtggaacg accccacctc gaggagcttc
781 ctgagcaggt ggcagaagat gcgattgact ggggcgactt tggggtagag gcagtgtctg
841 aggggactga ctctggcatc tctgccgagg ctgctggaat cgactggggc atcttcccgg
901 aatcagattc aaaggatcct ggaggtgatg ggatagactg gggagacgat gctgttgctt
961 tgcagatcac agtgctggaa gcaggaaccc aggctccaga aggtgttgcc aggggcccag
1021 atgccctgac actgcttgaa tacactgaga cccggaatca gttccttgat gagctcatgg
1081 agcttgagat cttcttagcc cagagagcag tggagttgag tgaggaggca gatgtcctgt
1141 ctgtgagcca gttccagctg gctccagcca tcctgcaggg ccagaccaaa gagaagatgg
1201 ttaccatggt gtcagtgctg gaggatctga ttggcaagct taccagtctt cagctgcaac
1261 acctgtttat gatcctggcc tcaccaaggt atgtggaccg agtgactgaa ttcctccagc
1321 aaaagctgaa gcagtcccag ctgctggctt tgaagaaaga gctgatggtg cagaagcagc
1381 aggaggcact tgaggagcag gcggctctgg agcctaagct ggacctgcta ctggagaaga
1441 ccaaggagct gcagaagctg attgaagctg acatctccaa gaggtacagc gggcgccctg
1501 tgaacctgat gggaacctct ctgtgacacc ctccgtgttc ttgcctgccc atcttctccg
1561 cttttgggat gaagatgata gccagggctg ttgttttggg gcccttcaag gcaaaagacc
1621 aggctgactg gaagatggaa agccacagga aggaagcggc acctgatggt gatcttggca
1681 ctctccatgt tctctacaag aagctgtggt gattggccct gtggtctacc aggcgaaaac
1741 cacagattct ccttctagtt agtatagcgg acttaataaa agaggaaaaa ccaaaaaaaa
1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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