LOCUS BC009947 2143 bp mRNA linear HUM 11-DEC-2003
DEFINITION Homo sapiens elastin microfibril interfacer 1, mRNA (cDNA clone
IMAGE:4136463), partial cds.
ACCESSION BC009947
VERSION BC009947.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2143)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2143)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC009947.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: i Column: 12.
FEATURES Location/Qualifiers
source 1..2143
/db_xref="H-InvDB:HIT000087413"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4136463"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2143
/gene="EMILIN1"
/gene_synonym="DKFZP586M121"
/gene_synonym="EMILIN"
/gene_synonym="EMILIN-1"
/gene_synonym="gp115"
/db_xref="GeneID:11117"
/db_xref="MIM:130660"
CDS <1..1745
/gene="EMILIN1"
/gene_synonym="DKFZP586M121"
/gene_synonym="EMILIN"
/gene_synonym="EMILIN-1"
/gene_synonym="gp115"
/codon_start=3
/product="EMILIN1 protein"
/protein_id="AAH09947.2"
/db_xref="GeneID:11117"
/db_xref="MIM:130660"
/translation="HWLPAARGRLEQLGGLLANVSGELGGRLDLLEEQVAGAMQACGQ
LCSGAPGEQDSQVSEILSALERRVLDSEGQLRLVGSGLHTVEAAGEARQATLEGLQEV
VGRLQDRVDAQDETAAEFTLRLNLTAARLGQLEGLLQAHGDEGCGACGGVQEELGRLR
DGVERCSCPLLPPRGPGAGPGVGGPSRGPLDGFSVFGGSSGSALQALQGELSEVILSF
SSLNDSLNELQTTVEGQGADLADLGATKDRIISEINRLQQEATEHATESEERFRGLEE
GQAQAGQCPSLEGRLGRLEGVCERLDTVAGGLQGLREGLSRHVAGLWAGLRETNTTSQ
MQAALLEKLVGGQAGLGRRLGALNSSLQLLEDRLHQLSLKDLTGPAGEAGPPGPPGLQ
GPPGPAGPPGSPGKDGQEGPIGPPGPQGEQGVEGAPAAPVPQVAFSAALSLPRSEPGT
VPFDRVLLNDGGYYDPETGVFTAPLAGRYLLSAVLTGHRHEKVEAVLSRSNQGVARVD
SGGYEPEGLENKPVAESQPSPGTLGVFSLILPLQAGDTVCVDLVMGQLAHSEEPLTIF
SGALLYGDPELEHA"
misc_feature 1299..1724
/gene="EMILIN1"
/gene_synonym="DKFZP586M121"
/gene_synonym="EMILIN"
/gene_synonym="EMILIN-1"
/gene_synonym="gp115"
/note="C1Q; Region: Complement component C1q domain"
/db_xref="CDD:smart00110"
BASE COUNT 372 a 659 c 771 g 341 t
ORIGIN
1 gccactggct gcctgctgcc cggggccgac tagagcagtt gggggggctg ctggccaatg
61 tgagcgggga gctggggggg cggttggatc tgttggagga gcaggtggca ggggccatgc
121 aggcatgcgg gcagctctgc tctggggccc ctggggagca ggactctcaa gtcagcgaga
181 tcctcagtgc cttggagcgc agggtgctgg acagtgaggg gcagctgcgg ctggtgggct
241 ccggcctgca cacggtggaa gcagcggggg aggcccggca ggccacgctg gagggattac
301 aagaggttgt gggccggctc caggatcgtg tggatgccca ggatgagaca gctgcagagt
361 tcacactacg gctgaatctc actgcggccc ggctaggcca actggagggg ctgctgcagg
421 cccatgggga tgagggctgt ggggcctgtg gcggagtcca agaggaacta ggccgccttc
481 gggatggtgt ggagcgctgc tcctgccccc tgttgcctcc tcggggtcct ggggctggtc
541 caggtgttgg gggcccaagc cgtgggcccc tggacggctt cagcgtgttt gggggcagct
601 caggctcagc cctgcaggcc ctgcaaggag agctctctga ggttattctc agcttcagct
661 ccctcaatga ctcactgaat gagctccaga ccactgtgga gggccagggc gctgatctgg
721 ctgacctggg ggcaaccaag gaccgtatca tttctgagat taacaggctg cagcaggagg
781 ccacagagca tgctacagag agtgaagagc gcttccgagg cctagaggag ggacaagcac
841 aggccggcca gtgccccagc ttagaggggc gattgggccg tcttgagggt gtctgtgaac
901 ggttggacac tgtggctggg ggactgcagg gcctgcgcga gggcctttcc agacacgtgg
961 ctgggctctg ggctgggctc cgggaaacca acaccaccag ccagatgcag gcagccctgc
1021 tggagaagct ggtcggggga caggcgggcc tgggcaggcg gctgggtgcc cttaacagct
1081 ccctgcagct cctggaggac cgtctgcacc agctcagcct gaaggacctc actgggcctg
1141 caggagaggc tgggccccca gggcctcctg ggctgcaggg acccccaggc cctgctggac
1201 ctccaggatc accaggcaag gacgggcaag agggccccat cgggccacca ggtcctcaag
1261 gtgaacaggg agtggagggg gcaccagcag cccctgtgcc ccaagtggca ttttcagctg
1321 ctctgagttt gccccggtct gaaccaggca cggtcccctt cgacagagtc ctgctcaatg
1381 atggaggcta ttatgatcca gagacaggcg tgttcacagc gccactggct ggacgctact
1441 tgctgagcgc ggtgctgact gggcaccggc acgagaaagt ggaggccgtg ctgtcccgct
1501 ccaaccaggg cgtggcccgc gtagactccg gtggctacga gcctgagggc ctggagaata
1561 agccggtggc cgagagccag cccagcccgg gcaccctggg cgtcttcagc ctcatcctgc
1621 cgctgcaggc cggggacacg gtctgcgtcg acctggtcat ggggcagctg gcgcactcgg
1681 aggagccgct caccatcttc agcggggccc tgctctatgg ggacccagag cttgaacacg
1741 cgtagactgg ggtcccgccc gacgtgtcta cgtcggctga agagacagcg ggggcggcgg
1801 gctcctgggg tctcgcctga gacggggcac ctagccctgg gcgagcgccg cacccgggcc
1861 cgcagcggca ccgcgcccag agcggcctct ccccacgccc ggggcgcgcc ggctcaggga
1921 ggctcggggc cgcccatgca gacttttggc ctggcgcgat cccccaagaa cccctccagg
1981 gccggcctgc ggaggagccg atcctcgcac cctccgctcc ctccactggc cctccaggtc
2041 gattccctgg gctccaggct cccccgcgcg ggcgccgccc accgccatac taaacgatcg
2101 aggaataaag acacttggtt tttctaaaaa aaaaaaaaaa aaa
//