LOCUS BC009936 2631 bp mRNA linear HUM 26-APR-2004 DEFINITION Homo sapiens phosphofurin acidic cluster sorting protein 1, mRNA (cDNA clone IMAGE:4134919), partial cds. ACCESSION BC009936 VERSION BC009936.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2631) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2631) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 17 Row: i Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 8922284. FEATURES Location/Qualifiers source 1..2631 /db_xref="H-InvDB:HIT000258936" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4134919" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..2631 /gene="PACS1" /gene_synonym="FLJ10209" /gene_synonym="KIAA1175" /db_xref="GeneID:55690" /db_xref="MIM:607492" CDS <1..1101 /gene="PACS1" /gene_synonym="FLJ10209" /gene_synonym="KIAA1175" /codon_start=1 /product="PACS1 protein" /protein_id="AAH09936.1" /db_xref="GeneID:55690" /db_xref="MIM:607492" /translation="GTRAVLSALLTRIQRYCNCNSSMPRPVKVAAVGGQSYLSSILRF FVKSLANKTSDWLGYMRFLIIPLGSHPVAKYLGSVDSKYSSSFLDSGWRDLFSRSEPP VSEQLDVAGRVMQYVNGAATTHQLPVAEAMLTCRHKFPDEDSYQKFIPFIGVVKVGLV EDSPSTAGDGDDSPVVSLTVPSTSPPSSSGLSRDATATPPSSPSMSSALAIVGSPNSP YGDVIGLQVDYWLGHPGERRREGDKRDASSKNTLKSVFRSVQVSRLPHSGEAQLSGTM AMTVVTKEKNKKVPTIFLSKKPREKEVDSKSQVIEGISRLICSAKQQQTMLRVSIDGV EWSDIKFFQLAAQWPTHVKHFPVGLFSGSKAT" BASE COUNT 526 a 904 c 632 g 569 t ORIGIN 1 ggcacgaggg ccgtgctgtc cgccctgctc acccggatcc agcgctactg caactgcaac 61 tcttccatgc cgaggccagt gaaggtggct gctgtgggag gccagagcta cctgagctcc 121 atcctcaggt tctttgtcaa gtccctggcc aacaagacct ccgactggct tggctacatg 181 cgcttcctca tcatccccct cggttctcac cctgtggcca aatacttggg gtcagtcgac 241 agtaaataca gtagttcctt cctggattct ggttggagag atctgttcag tcgctcggag 301 ccaccagtgt cagagcaact ggacgtggca gggcgggtga tgcagtacgt caacggggca 361 gccacgacac accagcttcc cgtggccgaa gccatgctga cttgccggca taagttccct 421 gatgaagact cctatcagaa gtttattccc ttcattggcg tggtgaaggt gggtctggtt 481 gaagactctc cctccacagc aggcgatggg gacgattctc ctgtggtcag ccttactgtg 541 ccctccacat caccaccctc cagctcgggc ctgagccgag acgccacggc cacccctccc 601 tcctccccat ctatgagcag cgccctggcc atcgtgggga gccctaatag cccatatggg 661 gacgtgattg gcctccaggt ggactactgg ctgggccacc ccggggagcg gaggagggaa 721 ggcgacaaga gggacgccag ctcgaagaac accctcaaga gtgtcttccg ctcagtgcag 781 gtgtcccgcc tgccccatag tggggaggcc cagctttctg gcaccatggc catgactgtg 841 gtcaccaaag aaaagaacaa gaaagttccc accatcttcc tgagcaagaa accccgagaa 901 aaggaggtgg attctaagag ccaggtcatt gaaggcatca gccgcctcat ctgctcagcc 961 aagcagcagc agactatgct gagagtgtcc atcgatgggg tcgagtggag tgacatcaag 1021 ttcttccagc tggcagccca gtggcccacc catgtcaagc actttccagt gggactcttc 1081 agtggcagca aggccacctg aggccctgtc tcccagccac tttccctcct ggcactgcca 1141 ccagcctcac cgcctgcggg cagggggagg ccagcaggcc cgggcccagc accccttccc 1201 tggcaccagg gtctgcctct cactcgccca ggtcccgaag gacactgcca cagggacgcc 1261 ttccctcccc tcccctccag cccacccctg cacagcccct cctccttccc gcttttcccc 1321 ttctccctcc tgctccaggc ccaaggcgtg ttggttttgc cttctggtgc ccatagtccc 1381 ctggactgag tcccccaggc cttccttcac ccgacttcca aactcttcct tgtggtatca 1441 gtttccttct cggaaatgag aaagctggaa tcctggtccc cagcaggaga gcctagtcct 1501 cccccagccc ctccagccac cagggtgtcc tctaggatgc agctgccaga tccactcact 1561 ctgctgcctc cagcaggacc caaggccact ttcaactctt atggggttct ccacctgccc 1621 cagagcttct caagggaggg taagggggca ccctgagccc acaggacccc tacttcacag 1681 ctcacagggg caggaggcag ctcccctgcc tccaggaccc tgttgctatg gtgacacagc 1741 gtttctagga cagaggggcc tcccagtctc cccccaccac ccgtgcacga cttcctcacc 1801 acccccaggt tccctgcaga tgtcgtgtgt gtcctgagtg tttctttggt tctttgcacg 1861 ccaagtctct tggttgtacc atgtgacaca ccctgtgcac tggtcgctgt cttcgtggct 1921 tccacccttg ttaatgatgc tcctgcctct gcctcccagc ccctcaccca gcacagctct 1981 gcctggactt ggagagatgg gaggcagacc cccaccacca tacatgctgt ctgtggcccc 2041 tcagacattc tgtttcatct cccattcatc tccctcctcc caccgtgtca gtttttctgc 2101 ctttccctgc tctgttcttc cccctcctta ggccccagcc tgggcccaga cccatcctcc 2161 cagccaggtt tccctccagc aggctccttc cctccctgtc acctccctct caccaacccg 2221 gggtctgagc ccctcattcc tgaccgtccg tgttctcagg agtggttgag gacacagggc 2281 cccagcccag ccctctgcac cccccagccc ggccatctgc gccccacagc ccctttggag 2341 cttttctctt gtcctctcac tccttcccag aagtttttgc acagaacttc attttgaaag 2401 tgtttttctc attctccata cctcccccaa gctctcctcc agcccttccc agggctcagc 2461 cctgctgtcc tgagcgtctc ctgggccaga gagaggagat gggggtggga gggactgagt 2521 tgatgttggg tttttcattc aataaattgg tgatttctta ccgaaaaaaa aaaaaaaaaa 2581 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a //