LOCUS BC009831 1101 bp mRNA linear HUM 03-NOV-2006
DEFINITION Homo sapiens RAB25, member RAS oncogene family, mRNA (cDNA clone
MGC:15077 IMAGE:3926839), complete cds.
ACCESSION BC009831
VERSION BC009831.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1101)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1101)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC009831.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: b Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9966860.
FEATURES Location/Qualifiers
source 1..1101
/db_xref="H-InvDB:HIT000034603"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15077 IMAGE:3926839"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1101
/gene="RAB25"
/gene_synonym="CATX-8"
/db_xref="GeneID:57111"
/db_xref="HGNC:HGNC:18238"
CDS 227..868
/gene="RAB25"
/gene_synonym="CATX-8"
/codon_start=1
/product="RAB25, member RAS oncogene family"
/protein_id="AAH09831.1"
/db_xref="GeneID:57111"
/db_xref="HGNC:HGNC:18238"
/translation="MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTT
IGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAV
VERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDST
NVELAFETVLKEIFAKVSKQRQNSIRTNAITLGSAQAGQEPGPGEKRACCISL"
BASE COUNT 253 a 331 c 278 g 239 t
ORIGIN
1 ctctgcttcc ttacagcacc cccacctgcc agagctgatc ctccctaggc cctgcctaac
61 cttgagttgg cccccaatcc ctctggctgc agaagtcccc ttacccccaa tgagaggagg
121 ggcaggacca gatcttttga gagctgaggg ttgagggcat tgagccaaca cacagatttg
181 tcgcctctgt ccccgaagac acctgcaccc tccatgcgga gccaagatgg ggaatggaac
241 tgaggaagat tataactttg tcttcaaggt ggtgctgatc ggcgaatcag gtgtggggaa
301 gaccaatcta ctctcccgat tcacgcgcaa tgagttcagc cacgacagcc gcaccaccat
361 cggggttgag ttctccaccc gcactgtgat gttgggcacc gctgctgtca aggctcagat
421 ctgggacaca gctggcctgg agcggtaccg agccatcacc tcggcgtact atcgtggtgc
481 agtgggggcc ctcctggtgt ttgacctaac caagcaccag acctatgctg tggtggagcg
541 atggctgaag gagctctatg accatgctga agccacgatc gtcgtcatgc tcgtgggtaa
601 caaaagtgac ctcagccagg cccgggaagt gcccactgag gaggcccgaa tgttcgctga
661 aaacaatgga ctgctcttcc tggagacctc agccctggac tctaccaatg ttgagctagc
721 ctttgagact gtcctgaaag aaatctttgc gaaggtgtcc aagcagagac agaacagcat
781 ccggaccaat gccatcactc tgggcagtgc ccaggctgga caggagcctg gccctgggga
841 gaagagggcc tgttgcatca gcctctgacc ttggccagca ccacctgccc ccactggctt
901 tttggtgccc cttgtcccca cttcagcccc aggacctttc cttgcccttt ggttccagat
961 atcagactgt tccctgttca cagcaccctc agggtcttaa ggtcttcatg ccctatcaca
1021 aatacctctt ttatctgtcc acccctcaca gactaggacc ctcaaataaa gctgttttat
1081 atcaaaaaaa aaaaaaaaaa a
//