LOCUS       BC009828                1643 bp    mRNA    linear   HUM 11-SEP-2007
DEFINITION  Homo sapiens LAG1 homolog, ceramide synthase 4, mRNA (cDNA clone
            MGC:15046 IMAGE:3936998), complete cds.
ACCESSION   BC009828
VERSION     BC009828.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1643)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1643)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-JUL-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Aug 20, 2003 this sequence version replaced BC009828.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 25 Row: d Column: 14
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 13375716.
FEATURES             Location/Qualifiers
     source          1..1643
                     /db_xref="H-InvDB:HIT000034600"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:15046 IMAGE:3936998"
                     /tissue_type="Lung, small cell carcinoma"
                     /clone_lib="NIH_MGC_7"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1643
                     /gene="LASS4"
                     /gene_synonym="CerS4"
                     /gene_synonym="Trh1"
                     /db_xref="GeneID:79603"
                     /db_xref="HGNC:HGNC:23747"
     CDS             124..1308
                     /gene="LASS4"
                     /gene_synonym="CerS4"
                     /gene_synonym="Trh1"
                     /codon_start=1
                     /product="LAG1 homolog, ceramide synthase 4"
                     /protein_id="AAH09828.1"
                     /db_xref="GeneID:79603"
                     /db_xref="HGNC:HGNC:23747"
                     /translation="MLSSFNEWFWQDRFWLPPNVTWTELEDRDGRVYPHPQDLLAALP
                     LALVLLAMRLAFERFIGLPLSRWLGVRDQTRRQVKPNATLEKHFLTEGHRPKEPQLSL
                     LAAQCGLTLQQTQRWFRRRRNQDRPQLTKKFCEASWRFLFYLSSFVGGLSVLYHESWL
                     WAPVMCWDRYPNQTLKPSLYWWYLLELGFYLSLLIRLPFDVKRKDFKEQVIHHFVAVI
                     LMTFSYSANLLRIGSLVLLLHDSSDYLLEACKMVNYMQYQQVCDALFLIFSFVFFYTR
                     LVLFPTQILYTTYYESISNRGPFFGYYFFNGLLMLLQLLHVFWSCLILRMLYSFMKKG
                     QMEKDIRSDVEESDSSEEVAAAQEPLQLKNGAAGGPRPAPTDGPQSRVAGRLTNRHTT
                     AT"
BASE COUNT          337 a          491 c          466 g          349 t
ORIGIN      
        1 gggggactga ttagaagcct cattcagtgc acctgggccc cagcaggccc agccaggcgt
       61 ggaggaagag gcattgagga ctttccttac ctgtttttcc agctcaccca ctgccagcag
      121 agaatgctgt ccagtttcaa cgagtggttt tggcaggaca ggttctggtt accacccaat
      181 gtcacgtgga cagagctaga agaccgggat ggccgtgtct acccccaccc ccaggacttg
      241 ttggcagccc tgcccctggc gctggtcctc ctggccatgc gccttgcctt tgagagattc
      301 attggcctgc ccctgagccg gtggctgggt gtgagggatc agaccaggag gcaagtgaag
      361 cccaacgcca cgctggagaa acacttcctc acggaagggc acaggcccaa ggagccccag
      421 ctgtctctcc tggccgccca gtgtggcctc acgctgcagc agacccagcg atggttccgg
      481 agacgccgga accaggatcg accccagctg accaagaagt tctgtgaggc cagctggagg
      541 tttctcttct acctgtcctc cttcgtgggc ggcctctcgg tcctgtacca cgagtcatgg
      601 ctgtgggcac cagtaatgtg ctgggacagg tacccaaacc agactctgaa gccatccctg
      661 tactggtggt acctcttgga gctgggtttc tacctctcac tgctaatcag gctgcccttt
      721 gatgtcaagc gcaaggattt caaggagcag gtgatacacc acttcgtggc ggtcatcctg
      781 atgaccttct cctacagtgc caacctgctg cgcattggct ctctggtgct gctgttacat
      841 gattcctctg actacctgct ggaggcctgt aagatggtca actacatgca gtatcagcaa
      901 gtgtgcgacg ctctcttcct catcttctcc tttgtcttct tctacacccg actggtcctc
      961 tttcccaccc agatcctcta caccacatac tacgagtcca tcagcaacag gggccccttc
     1021 ttcggctact acttcttcaa cgggcttctg atgttgctgc agctgctgca cgtgttctgg
     1081 tcttgcctca ttctgcgcat gctctatagc ttcatgaaga agggccagat ggagaaggac
     1141 attcgtagtg atgtagaaga atcagactcc agtgaggagg tggcggcggc ccaggaacct
     1201 ctgcagctaa agaacggggc agctggaggg cccaggccag cccccactga tggccctcag
     1261 agccgggtgg ccgggcgtct gaccaacagg cacacaacag ccacatagcc gggtggggct
     1321 ggctgtaagg ggttgccccc ccgccagtgc cttggatatt tctggggtga ctggactggc
     1381 gcccctgggc cacctttctg gagacaggga gggccccacc cggggtgggt gggaaggctg
     1441 atgatctgtc tccagcccct tccttctgcc cacccgccct tcttccctct gggcaactgg
     1501 acagatctgg gagccagcag ctggatgctg tggctggcca gagacacctc caggctgtag
     1561 cctgggggct ggggggagcc ccaggctgaa aagggtccaa ttaaaacaaa tggagccaaa
     1621 aaaaaaaaaa aaaaaaaaaa aaa
//