LOCUS BC009828 1643 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens LAG1 homolog, ceramide synthase 4, mRNA (cDNA clone MGC:15046 IMAGE:3936998), complete cds. ACCESSION BC009828 VERSION BC009828.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1643) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1643) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 20, 2003 this sequence version replaced BC009828.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 25 Row: d Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 13375716. FEATURES Location/Qualifiers source 1..1643 /db_xref="H-InvDB:HIT000034600" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:15046 IMAGE:3936998" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1643 /gene="LASS4" /gene_synonym="CerS4" /gene_synonym="Trh1" /db_xref="GeneID:79603" /db_xref="HGNC:HGNC:23747" CDS 124..1308 /gene="LASS4" /gene_synonym="CerS4" /gene_synonym="Trh1" /codon_start=1 /product="LAG1 homolog, ceramide synthase 4" /protein_id="AAH09828.1" /db_xref="GeneID:79603" /db_xref="HGNC:HGNC:23747" /translation="MLSSFNEWFWQDRFWLPPNVTWTELEDRDGRVYPHPQDLLAALP LALVLLAMRLAFERFIGLPLSRWLGVRDQTRRQVKPNATLEKHFLTEGHRPKEPQLSL LAAQCGLTLQQTQRWFRRRRNQDRPQLTKKFCEASWRFLFYLSSFVGGLSVLYHESWL WAPVMCWDRYPNQTLKPSLYWWYLLELGFYLSLLIRLPFDVKRKDFKEQVIHHFVAVI LMTFSYSANLLRIGSLVLLLHDSSDYLLEACKMVNYMQYQQVCDALFLIFSFVFFYTR LVLFPTQILYTTYYESISNRGPFFGYYFFNGLLMLLQLLHVFWSCLILRMLYSFMKKG QMEKDIRSDVEESDSSEEVAAAQEPLQLKNGAAGGPRPAPTDGPQSRVAGRLTNRHTT AT" BASE COUNT 337 a 491 c 466 g 349 t ORIGIN 1 gggggactga ttagaagcct cattcagtgc acctgggccc cagcaggccc agccaggcgt 61 ggaggaagag gcattgagga ctttccttac ctgtttttcc agctcaccca ctgccagcag 121 agaatgctgt ccagtttcaa cgagtggttt tggcaggaca ggttctggtt accacccaat 181 gtcacgtgga cagagctaga agaccgggat ggccgtgtct acccccaccc ccaggacttg 241 ttggcagccc tgcccctggc gctggtcctc ctggccatgc gccttgcctt tgagagattc 301 attggcctgc ccctgagccg gtggctgggt gtgagggatc agaccaggag gcaagtgaag 361 cccaacgcca cgctggagaa acacttcctc acggaagggc acaggcccaa ggagccccag 421 ctgtctctcc tggccgccca gtgtggcctc acgctgcagc agacccagcg atggttccgg 481 agacgccgga accaggatcg accccagctg accaagaagt tctgtgaggc cagctggagg 541 tttctcttct acctgtcctc cttcgtgggc ggcctctcgg tcctgtacca cgagtcatgg 601 ctgtgggcac cagtaatgtg ctgggacagg tacccaaacc agactctgaa gccatccctg 661 tactggtggt acctcttgga gctgggtttc tacctctcac tgctaatcag gctgcccttt 721 gatgtcaagc gcaaggattt caaggagcag gtgatacacc acttcgtggc ggtcatcctg 781 atgaccttct cctacagtgc caacctgctg cgcattggct ctctggtgct gctgttacat 841 gattcctctg actacctgct ggaggcctgt aagatggtca actacatgca gtatcagcaa 901 gtgtgcgacg ctctcttcct catcttctcc tttgtcttct tctacacccg actggtcctc 961 tttcccaccc agatcctcta caccacatac tacgagtcca tcagcaacag gggccccttc 1021 ttcggctact acttcttcaa cgggcttctg atgttgctgc agctgctgca cgtgttctgg 1081 tcttgcctca ttctgcgcat gctctatagc ttcatgaaga agggccagat ggagaaggac 1141 attcgtagtg atgtagaaga atcagactcc agtgaggagg tggcggcggc ccaggaacct 1201 ctgcagctaa agaacggggc agctggaggg cccaggccag cccccactga tggccctcag 1261 agccgggtgg ccgggcgtct gaccaacagg cacacaacag ccacatagcc gggtggggct 1321 ggctgtaagg ggttgccccc ccgccagtgc cttggatatt tctggggtga ctggactggc 1381 gcccctgggc cacctttctg gagacaggga gggccccacc cggggtgggt gggaaggctg 1441 atgatctgtc tccagcccct tccttctgcc cacccgccct tcttccctct gggcaactgg 1501 acagatctgg gagccagcag ctggatgctg tggctggcca gagacacctc caggctgtag 1561 cctgggggct ggggggagcc ccaggctgaa aagggtccaa ttaaaacaaa tggagccaaa 1621 aaaaaaaaaa aaaaaaaaaa aaa //