LOCUS BC009780 1191 bp mRNA linear HUM 16-SEP-2003 DEFINITION Homo sapiens splicing factor 3b, subunit 3, 130kDa, mRNA (cDNA clone IMAGE:4293370), complete cds. ACCESSION BC009780 VERSION BC009780.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1191) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1191) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 19 Row: n Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 11034822 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1191 /db_xref="H-InvDB:HIT000034570" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4293370" /tissue_type="Skeletal Muscle" /clone_lib="NIH_MGC_81" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1191 /gene="SF3B3" /gene_synonym="KIAA0017" /gene_synonym="RSE1" /gene_synonym="SAP130" /gene_synonym="SF3b130" /db_xref="GeneID:23450" /db_xref="MIM:605592" CDS 182..1009 /gene="SF3B3" /gene_synonym="KIAA0017" /gene_synonym="RSE1" /gene_synonym="SAP130" /gene_synonym="SF3b130" /codon_start=1 /product="SF3B3 protein" /protein_id="AAH09780.1" /db_xref="GeneID:23450" /db_xref="MIM:605592" /translation="MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPD PNTGKVHTLLTVEVFGVIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKI HQETFGKSGCRRIVPGQFLAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEA HKANTLVYHVVGVDVGFENPMFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLN HVVRKYSEPLEEHGNFLITVPGGSDGPSGVLNLSPPFPKAIPALICLDSPVYFCTHP" BASE COUNT 324 a 253 c 286 g 328 t ORIGIN 1 gggggtcttg aggtctaatg gcggacgcca gtatgttgga attggtggtg gcttaagttt 61 tgaagggagg tagcatccgt tggatatcca caccatcctt ctcgctgcag gctttcttgg 121 actccgtact gttggtgtaa ccaaggcctg gaggtctggg tggctcaggt ttcctgcagc 181 catgtttctg tacaacttaa ccttgcagag agccactggc atcagctttg ccattcatgg 241 aaacttttct ggaaccaaac aacaagaaat tgttgtttcc cgtgggaaga tcttggagct 301 gcttcgccca gaccccaaca ctggcaaagt acatacccta ctcactgtgg aagtattcgg 361 tgttatccgg tcactcatgg cctttaggct gacaggtggc accaaagact acattgtagt 421 tggcagtgac tctggtcgaa ttgttatttt ggaataccag ccatctaaga atatgtttga 481 gaagattcac caagaaacct ttggcaagag tggatgccgt cgcatcgttc ctggccagtt 541 cttagctgtg gatcccaaag ggcgagccgt tatgattagt gccattgaga aacagaaatt 601 ggtgtatatt ttgaacagag atgctgcagc ccgacttacc atttcatctc ccctggaagc 661 ccacaaagca aacactttag tgtatcatgt agttggagta gatgtcggat ttgaaaatcc 721 aatgtttgct tgtctggaaa tggattatga ggaagcagac aatgatccaa caggggaagc 781 agcagctaat acccagcaga cacttacttt ctatgagcta gaccttggtt taaatcatgt 841 ggtccgaaaa tacagtgaac ctttggagga acacggcaac ttccttatta cagttccagg 901 agggtcagat ggtccaagtg gagtactgaa cctgagtccc ccattcccca aagccatccc 961 tgcattgata tgtcttgact ctcctgtcta cttttgcaca cacccttaat ttttaattgg 1021 ttttcttgta aatacagttt tgtacaatgt tatctctgtg ggaggaagga ggcaggctgt 1081 ggtgggactg ggtagggtat agtatcactc ctgagttcca ctgctctaga atctaaccag 1141 aaatagaaac ctagttttta aggcaaaaaa aaaaaaaaaa aaaaaaaaaa a //