LOCUS BC009743 1999 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 9, mRNA (cDNA clone
MGC:10357 IMAGE:3832697), complete cds.
ACCESSION BC009743
VERSION BC009743.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1999)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1999)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009743.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: h Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7661689.
FEATURES Location/Qualifiers
source 1..1999
/db_xref="H-InvDB:HIT000034543"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10357 IMAGE:3832697"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1999
/gene="CCDC9"
/gene_synonym="DKFZP586M1019"
/db_xref="GeneID:26093"
/db_xref="HGNC:HGNC:24560"
CDS 104..1699
/gene="CCDC9"
/gene_synonym="DKFZP586M1019"
/codon_start=1
/product="coiled-coil domain containing 9"
/protein_id="AAH09743.1"
/db_xref="GeneID:26093"
/db_xref="HGNC:HGNC:24560"
/translation="MAATLDLKSKEEKDAELDKRIEALRRKNEALIRRYQEIEEDRKK
AELEGVAVTAPRKGRSVEKENVAVESEKNLGPSRRSPGTPRPPGASKGGRTPPQQGGR
AGMGRASRSWEGSPGEQPRGGGAGGRGRRGRGRGSPHLSGAGDTSISDRKSKEWEERR
RQNIEKMNEEMEKIAEYERNQREGVLEPNPVRNFLDDPRRRSGPLEESERDRREESRR
HGRNWGGPDFERVRCGLEHERQGRRAGLGSAGDMTLSMTGRERSEYLRWKQEREKIDQ
ERLQRHRKPTGQWRREWDAEKTDGMFKDGPVPAHEPSHRYDDQAWARPPKPPTFGEFL
SQHKAEASSRRRRKSSRPQAKAAPRAYSDHDDRWETKEGAASPAPETPQPTSPETSPK
ETPMQPPEIPAPAHRPPEDEGEENEGEEDEEWEDISEDEEEEEIEVEEGDEEEPAQDH
QAPEAAPTGIPCSEQAHGVPFSPEEPLLEPQAPGTPSSPFSPPSGHQPVSDWGEEVEL
NSPRTTHLAGALSPGEAWPFESV"
BASE COUNT 435 a 578 c 695 g 291 t
ORIGIN
1 gagtcgcgga cgccgcgggg tctccgggac aggaaccctc agtgctgcgt ctagattctg
61 caggggaggt ttgctgggac cttggctcca cccagccagc gaaatggcag ccacactcga
121 tttgaaatca aaggaggaga aggatgctga gttggacaag aggatcgagg ctcttcggcg
181 gaagaatgag gccctcatcc ggcgctacca ggagattgag gaagaccgta agaaagctga
241 acttgaggga gtcgcagtca cagctccccg aaagggccgc tcagtggaga aggagaacgt
301 ggcagtggag tcggagaaga acctgggtcc ttcccggagg tctcctggga cccctcggcc
361 cccaggggcc agcaaggggg gccggactcc tccacagcag ggaggccggg ccggcatggg
421 ccgagcatcg cgcagctggg agggcagccc cggggagcag cctcgaggag gaggagctgg
481 gggccgtggc cggaggggcc ggggccgagg ttcacctcac ctctctggag ctggagacac
541 ctcaatctct gaccgtaaat ccaaggagtg ggaggagcgg cgcaggcaga acattgagaa
601 gatgaatgag gagatggaga agatcgccga gtatgagcgc aaccagcggg aaggggttct
661 tgaacccaac ccagtgcgga acttcctgga cgacccccgg cgacgcagcg ggcccctgga
721 ggagtctgag cgggaccgcc gggaggagag ccgccggcac ggccgcaact gggggggccc
781 cgacttcgag cgggtgcgct gtggccttga gcacgagcgg cagggccgcc gagctggcct
841 gggcagtgct ggagacatga cgttgtccat gacgggccgg gagcggtcgg agtacctgcg
901 ctggaagcag gagagggaga agatcgacca ggagcggctg cagaggcacc gcaagcccac
961 tggccagtgg aggcgcgagt gggatgccga gaagaccgat gggatgttca aggatggccc
1021 agtccctgcc catgaaccat cccaccgcta tgatgaccag gcctgggccc ggcccccgaa
1081 gccccctact tttggggagt tcctgtccca gcacaaagct gaggccagca gccgcagaag
1141 gagaaagagc agtcggcccc aggccaaggc agcgcccagg gcctacagtg accatgatga
1201 ccgctgggag acaaaagaag gggcagcatc cccagcccct gagactccac agcctacttc
1261 ccccgagact tcccccaagg agacacccat gcagccaccc gagatcccag ctcctgccca
1321 ccggcctcct gaagacgagg gggaagagaa tgagggggaa gaggatgaag aatgggagga
1381 cataagtgag gatgaggaag aggaggagat cgaggtggaa gaaggtgatg aggaggaacc
1441 agcccaagac caccaagccc cagaggctgc ccccaccggg atcccctgca gtgagcaggc
1501 ccacggagtc cccttcagtc cggaggagcc cctgctggag ccccaggccc ctggcacgcc
1561 ttccagccct ttctcaccac ccagcggcca ccagcctgtg tccgattggg gtgaagaggt
1621 ggagctgaat tctccccgga ccactcacct ggctggcgcc ctctccccgg gtgaggcctg
1681 gccttttgag agtgtatgaa gctggctgcc tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
1741 tgtgtgtgtg tgtgtgtgtg tgtgtgcgcg cgcgcgcgct agaggggtgt ggctggtggg
1801 ggacccttgg ggctgggccc tgggacccag tgtgccccac agccctgtca gctgaggggg
1861 tagcgcagcc catgctcttc tgtactgtca tgcccgtctc tggaatgtcc actcccagag
1921 cctgccccag cccttcgagc cccctcccca ataaagaatt cacatcctcc aatgaaaaaa
1981 aaaaaaaaaa aaaaaaaaa
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