LOCUS BC009704 1416 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tetraspanin 5, mRNA (cDNA clone MGC:9300
IMAGE:3895933), complete cds.
ACCESSION BC009704
VERSION BC009704.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1416)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1416)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: h Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21264582.
FEATURES Location/Qualifiers
source 1..1416
/db_xref="H-InvDB:HIT000034518"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9300 IMAGE:3895933"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1416
/gene="TSPAN5"
/gene_synonym="NET-4"
/gene_synonym="TSPAN-5"
/db_xref="GeneID:10098"
/db_xref="HGNC:HGNC:17753"
CDS 334..1140
/gene="TSPAN5"
/gene_synonym="NET-4"
/gene_synonym="TSPAN-5"
/codon_start=1
/product="tetraspanin 5"
/protein_id="AAH09704.1"
/db_xref="GeneID:10098"
/db_xref="HGNC:HGNC:17753"
/translation="MSGKHYKGPEVSCCIKYFIFGFNVIFWFLGITFLGIGLWAWNEK
GVLSNISSITDLGGFDPVWLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIF
FLELTAGVLAFVFKDWIKDQLYFFINNNIRAYRDDIDLQNLIDFTQEYWQCCGAFGAD
DWNLNIYFNCTDSNASRERCGVPFSCCTKDPAEDVINTQCGYDARQKPEVDQQIVIYT
KGCVPQFEKWLQDNLTIVAGIFIGIALLQIFGICLAQNLVSDIEAVRASW"
BASE COUNT 325 a 354 c 385 g 352 t
ORIGIN
1 cggggacgaa ccgacggacc gaccgcctgg cgcacggacg cgggcgctcg ctttgtgttc
61 ggggctagcg tcggcgaggc ttgagcttgc agcgcgcggc ttccctgctt tctcgcggcc
121 accccggctc cggcggcctc ggcgcgcgag gggctggagg tgcgggagcc gctctccgcc
181 ggtcggtccc cgcgcggctg agcccaggcc gccagcgccg cggccccgtg cggtgtccct
241 gagctcctgc tccccgccgg gctgctccga gcaacggtgc ttcggagctc caaactcggg
301 ctgccggggc aagtgtcttc atgaacccag aggatgtccg ggaagcacta caagggtcct
361 gaagtcagtt gttgcatcaa atacttcata tttggcttca atgtcatatt ttggtttttg
421 ggaataacat ttcttggaat tggactgtgg gcatggaatg aaaaaggagt tctgtccaac
481 atctcttcca tcaccgatct cggcggcttt gacccagttt ggctcttcct tgtggtggga
541 ggagtgatgt tcattttggg atttgcaggg tgcattggag cgctacggga aaacactttc
601 cttctcaagt ttttttctgt gttcctggga attattttct tcctggagct cactgccgga
661 gttctagcat ttgttttcaa agactggatc aaagaccagc tgtatttctt tataaacaac
721 aacatcagag catatcggga tgacattgat ttgcaaaacc tcatagactt cacccaggaa
781 tattggcagt gctgtggggc ttttggagct gatgattgga acctaaatat ttacttcaat
841 tgcacagatt ccaatgcaag tcgagagcga tgtggcgttc cattctcctg ctgcactaaa
901 gatcccgcag aagatgtcat caacactcag tgtggctatg atgccaggca aaaaccagaa
961 gttgaccagc agattgtaat ctacacgaaa ggctgtgtgc cccagtttga gaagtggttg
1021 caggacaatt taaccatcgt tgctggtatt ttcataggca ttgcattgct gcagatattt
1081 gggatatgcc tggcccagaa tttggttagc gatatcgaag ctgtcagggc gagctggtag
1141 accccctgca accgctgctg caagacactg gacagaccca gctttcggga ccctcccgcg
1201 tgccgaactg atcttcgagc tgcatggacc taatcacaga tgcagcctgc agtctcgcct
1261 aatggagctg ccattagggg agtgtaaaac tgggaaatgc tgctcactga cagaattaaa
1321 aaaaaaaata accagtatga aagtcgttgc gccgtgaatc tctactgtag ccatgaattt
1381 atggacagtt agatgcttac caaaaaaaaa aaaaaa
//