LOCUS BC009698 402 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens apolipoprotein C-I, mRNA (cDNA clone MGC:9245 IMAGE:3889900), complete cds. ACCESSION BC009698 VERSION BC009698.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 402) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 402) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC009698.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP/Gazdar cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 14 Row: d Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 51944963. FEATURES Location/Qualifiers source 1..402 /db_xref="H-InvDB:HIT000034513" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9245 IMAGE:3889900" /tissue_type="Lung, carcinoma, large cell undifferentiated." /clone_lib="NIH_MGC_69" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..402 /gene="APOC1" /db_xref="GeneID:341" /db_xref="HGNC:HGNC:607" /db_xref="MIM:107710" CDS 23..274 /gene="APOC1" /codon_start=1 /product="apolipoprotein C-I" /protein_id="AAH09698.1" /db_xref="GeneID:341" /db_xref="HGNC:HGNC:607" /db_xref="MIM:107710" /translation="MRLFLSLPVLVVVLSIVLEGPAPAQGTPDVSSALDKLKEFGNTL EDKARELISRIKQSELSAKMREWFSETFQKVKEKLKIDS" BASE COUNT 108 a 111 c 107 g 76 t ORIGIN 1 agagtgcccc tccggcctcg ccatgaggct cttcctgtcg ctcccggtcc tggtggtggt 61 tctgtcgatc gtcttggaag gcccagcccc agcccagggg accccagacg tctccagtgc 121 cttggataag ctgaaggagt ttggaaacac actggaggac aaggctcggg aactcatcag 181 ccgcatcaaa cagagtgaac tttctgccaa gatgcgggag tggttttcag agacatttca 241 gaaagtgaag gagaaactca agattgactc atgaggacct gaagggtgac atcccaggag 301 gggcctctga aatttcccac accccagcgc ctgtgctgag gactccctcc atgtggcccc 361 aggtgccacc aataaaaatc ctacagaaaa aaaaaaaaaa aa //