LOCUS BC009674 1181 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens Yip1 domain family, member 1, mRNA (cDNA clone
IMAGE:3894129), complete cds.
ACCESSION BC009674
VERSION BC009674.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1181)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1181)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: g Column: 18
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1181
/db_xref="H-InvDB:HIT000034494"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3894129"
/tissue_type="Lung, carcinoma, large cell
undifferentiated."
/clone_lib="NIH_MGC_69"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1181
/gene="YIPF1"
/gene_synonym="DJ167A19.1"
/gene_synonym="FinGER1"
/db_xref="GeneID:54432"
CDS 234..605
/gene="YIPF1"
/gene_synonym="DJ167A19.1"
/gene_synonym="FinGER1"
/codon_start=1
/product="YIPF1 protein"
/protein_id="AAH09674.1"
/db_xref="GeneID:54432"
/translation="MWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVR
WILVMIALGISGSLLAMTFWPAVREDNRRVALATIVTIVLLHMLLSVGCLAYFFDAPE
MDHLPTTTATPNQTVAAAKSS"
BASE COUNT 317 a 271 c 260 g 333 t
ORIGIN
1 ggaaaaactt ggtgaggtta tatatccgca gcaatccaga tctctatggc cccttttgga
61 tatgtgccac gttggtcttt gccatagcaa ttagtgggaa tctttccaac ttcttgatcc
121 atctgggaga gaagacgtac cattatgtgc ccgaattccg aaaagtgtcc atagcagcta
181 ccatcatcta tgcctatgcc tggctggttc ctcttgcact ctggggtttc ctcatgtgga
241 gaaacagcaa agttatgaac atcgtctcct attcatttct ggagattgtg tgtgtctatg
301 gatattccct cttcatttat atccccaccg caatactgtg gattatcccc cagaaagctg
361 ttcgttggat tctagtcatg attgccctgg gcatctcagg atctctcttg gcaatgacat
421 tttggccagc tgttcgtgag gataaccgac gcgttgcatt ggccacaatt gtgacaattg
481 tgttgctcca tatgctgctt tctgtgggct gcttggcata cttttttgat gcaccagaga
541 tggaccatct cccaacaact acagctactc caaaccaaac agttgctgca gccaagtcca
601 gctaatgagg aaattctctt ttgttttttg gagcatggtt ctttgggaag tggcatccac
661 tgcaggaaag cagaatgagc agagccagca gaactgatgg agtggcacaa attcccagtg
721 tctggatggt gccacactgg cgcctaatca cccgtttaac aagcagaaat taaatgttgc
781 tcagcacatg tgtctttcag ctcttccttt tcacccatgg atgatcattg cgagcatgcg
841 ctgattggac tgaaatgccg gggaataggt taggcatgct cagtgccgtc cctttgccac
901 cacagtcaaa tgacatgctt cactgtggta ccttaatacc tgaaatagaa ccatggaaaa
961 ttctgatgtc ctctctctga attatgtaca gactacctgg gggatcctct tctctccaaa
1021 tgttagccat cctgaagtag ccgaacagta gaaactttgg tggggattaa ccgggagctt
1081 gaaaatttgt ctttggtaac ctgatactgg acagctgaac tgaatggctg caaaataaat
1141 acctcacatg aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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