LOCUS BC009623 1220 bp mRNA linear HUM 19-JAN-2018
DEFINITION Homo sapiens nucleophosmin (nucleolar phosphoprotein B23,
numatrin), mRNA (cDNA clone MGC:17308 IMAGE:3877633), complete cds.
ACCESSION BC009623
VERSION BC009623.3
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1220)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1220)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
REFERENCE 3 (bases 1 to 1220)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JAN-2018) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK Sequence update by database staff to remove vector contamination
COMMENT On Jan 19, 2018 this sequence version replaced BC009623.2.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: b Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40353733.
FEATURES Location/Qualifiers
source 1..1220
/db_xref="H-InvDB:HIT000034480"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17308 IMAGE:3877633"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1220
/gene="NPM1"
/gene_synonym="B23"
/gene_synonym="NPM"
/db_xref="GeneID:4869"
/db_xref="HGNC:HGNC:7910"
/db_xref="IMGT/GENE-DB:7910"
/db_xref="MIM:164040"
CDS 91..888
/gene="NPM1"
/gene_synonym="B23"
/gene_synonym="NPM"
/codon_start=1
/product="NPM1 protein"
/protein_id="AAH09623.1"
/db_xref="GeneID:4869"
/db_xref="HGNC:HGNC:7910"
/db_xref="IMGT/GENE-DB:7910"
/db_xref="MIM:164040"
/translation="MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSL
RTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRL
KCGSGPVHISGQHLVAVEEDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAA
DEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKKGQESFKKQEKTPKTPKGPSSVEDI
KAKMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL"
BASE COUNT 394 a 201 c 300 g 325 t
ORIGIN
1 tgtgattccg tcctgcgcgg ttgttctctg gagcagcgtt cttttatctc cgtccgcctt
61 ctctcctacc taagtgcgtg ccgccacccg atggaagatt cgatggacat ggacatgagc
121 cccctgaggc cccagaacta tcttttcggt tgtgaactaa aggccgacaa agattatcac
181 tttaaggtgg ataatgatga aaatgagcac cagttatctt taagaacggt cagtttaggg
241 gctggtgcaa aggatgagtt gcacattgtt gaagcagagg caatgaatta cgaaggcagt
301 ccaattaaag taacactggc aactttgaaa atgtctgtac agccaacggt ttcccttggg
361 ggctttgaaa taacaccacc agtggtctta aggttgaagt gtggttcagg gccagtgcat
421 attagtggac agcacttagt agctgtggag gaagatgcag agtcagaaga tgaagaggag
481 gaggatgtga aactcttaag tatatctgga aagcggtctg cccctggagg tggtagcaag
541 gttccacaga aaaaagtaaa acttgctgct gatgaagatg atgacgatga tgatgaagag
601 gatgatgatg aagatgatga tgatgatgat tttgatgatg aggaagctga agaaaaagcg
661 ccagtgaaga aaggacaaga atccttcaag aaacaggaaa aaactcctaa aacaccaaaa
721 ggacctagtt ctgtagaaga cattaaagca aaaatgcaag caagtataga aaaaggtggt
781 tctcttccca aagtggaagc caaattcatc aattatgtga agaattgctt ccggatgact
841 gaccaagagg ctattcaaga tctctggcag tggaggaagt ctctttaaga aaatagttta
901 aacaatttgt taaaaaattt tccgtcttat ttcatttctg taacagttga tatctggctg
961 tcctttttat aatgcagagt gagaactttc cctaccgtgt ttgataaatg ttgtccaggt
1021 tctattgcca agaatgtgtt gtccaaaatg ccgtttagtt tttaaagatg gaactccacc
1081 ctttgcttgg ttttaagtat gtatggaatg ttatgatagg acatagtagt agcggtggtc
1141 agacatggaa atggtgggga gacaaaaata tacatgtgaa ataaaactca gtattttaat
1201 aaagtaaaaa aaaaaaaaaa
//