LOCUS BC009613 1425 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens leucine rich repeat containing 39, mRNA (cDNA clone MGC:14816 IMAGE:4245944), complete cds. ACCESSION BC009613 VERSION BC009613.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1425) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1425) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 21 Row: k Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21389430. FEATURES Location/Qualifiers source 1..1425 /db_xref="H-InvDB:HIT000034473" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:14816 IMAGE:4245944" /tissue_type="Skeletal Muscle" /clone_lib="NIH_MGC_81" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1425 /gene="LRRC39" /gene_synonym="MGC14816" /db_xref="GeneID:127495" /db_xref="HGNC:HGNC:28228" CDS 200..1207 /gene="LRRC39" /gene_synonym="MGC14816" /codon_start=1 /product="leucine rich repeat containing 39" /protein_id="AAH09613.1" /db_xref="GeneID:127495" /db_xref="HGNC:HGNC:28228" /translation="MTENVVCTGAVNAVKEVWEKRIKKLNEDLKREKEFQHKLVRIWE ERVSLTKLREKVTREDGRVILKIEKEEWKTLPSSLLKLNQLQEWQLHRTGLLKIPEFI GRFQNLIVLDLSRNTISEIPPGIGLLTRLQELILSYNKIKTVPKELSNCASLEKLELA VNRDICDLPQELSNLLKLTHLDLSMNDFTTIPLAVLNMPALEWLDMGSNKLEQLPDTI ERMQNLHTLWLQRNEITCLPQTISNMKNLGTLVLSNNKLQDIPVCMEEMANLRFVNFR DNPLKLKVSLPPSEGTDEEEERELFGLQFMHTYIQESRRRADHQVNGSTTLPISINTD G" BASE COUNT 520 a 252 c 270 g 383 t ORIGIN 1 atcatttgga gccacactga aaaaaaaatt tccccctgca atctactctt aactgatagt 61 cgctaacttt ggttatgtgt gtctattcag aatattacat taattgattt ctcaaacaaa 121 ggtcctttct gaaatggtat ctatgattca gctattcaaa acctaatgaa gttggtgact 181 atgacaatgt ggagaaatca tgacagaaaa tgtggtttgt actggggctg tcaatgctgt 241 aaaggaagtt tgggaaaaaa gaataaagaa actcaatgaa gacctgaagc gagagaagga 301 atttcaacac aagctagtgc ggatctggga agaacgagta agcttaacca agctaagaga 361 aaaggtcacc agggaagatg gaagagtcat tttgaagata gaaaaagagg aatggaagac 421 cctcccttct tctctgctga aactgaatca actacaggaa tggcaacttc atagaactgg 481 tttgctgaaa attcctgaat tcattggaag attccagaac ctcattgtgt tagatttatc 541 tcgaaacaca atttcagaga taccaccagg gattggactg cttactagac ttcaggaact 601 gattctcagc tacaacaaaa tcaagactgt ccccaaggaa ctaagtaatt gtgccagctt 661 ggagaaacta gaactggctg ttaacagaga tatatgtgat cttccacaag agctcagcaa 721 tctgctaaaa cttactcacc ttgatctgag tatgaacgat tttactacaa tccctcttgc 781 tgtgttgaac atgcctgccc ttgagtggct ggacatggga agcaacaaac ttgaacaact 841 tcctgatact atagaaagaa tgcaaaatct acatacgtta tggctgcaac gaaatgaaat 901 aacatgcttg cctcaaacaa tcagcaatat gaaaaatctg ggtactcttg ttctcagcaa 961 caataaactg caagatattc cagtatgcat ggaagaaatg gcaaatctga ggtttgtcaa 1021 cttcagagac aacccactga aattgaaagt atcacttcct cccagtgaag gcacagatga 1081 agaagaggaa cgggaattat ttggccttca gtttatgcac acatacatac aagagtcacg 1141 gagaagagca gatcaccaag tcaacggttc aactacttta ccaatctcca taaatacgga 1201 tggataatat aattcaagat gcccttctaa agaggattac tttggtgaat tctctaatgt 1261 ttggatttct gaagtaaaaa gaaaagctat taccaaagtt taatgaggcc acagcatttt 1321 ttaaagttca tattatttgc tatttaaagt atatattttt ttgatataaa aatataatta 1381 aaaaattttt ttggtcaaaa aaaaaaaaaa aaaaaaaaaa aaaaa //