LOCUS BC009523 989 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens chromosome X open reading frame 40B, mRNA (cDNA clone MGC:10039 IMAGE:3889701), complete cds. ACCESSION BC009523 VERSION BC009523.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 989) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 989) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP/Gazdar cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 14 Row: d Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 62241037. FEATURES Location/Qualifiers source 1..989 /db_xref="H-InvDB:HIT000034423" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10039 IMAGE:3889701" /tissue_type="Lung, carcinoma, large cell undifferentiated." /clone_lib="NIH_MGC_69" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..989 /gene="CXorf40B" /db_xref="GeneID:541578" /db_xref="HGNC:HGNC:17402" CDS 123..599 /gene="CXorf40B" /codon_start=1 /product="chromosome X open reading frame 40B" /protein_id="AAH09523.1" /db_xref="GeneID:541578" /db_xref="HGNC:HGNC:17402" /translation="MKFGCLSFRQPYAGFVLNGIKTVETRWRPLLSSQRNCTIAVHIA HRDWEGDACRELLVERLGMTPAQIQALLRKGEKFGRGVIAGLVDIGETLQCPEDLTPD EVVELENQAALTNLKQKYLTVISNPRWLLEPIPRKGGKDVFQVDIPEHLIPLGHEV" BASE COUNT 277 a 219 c 269 g 224 t ORIGIN 1 ggatggacct gagtcagccg aatcctagcc ccttcccttg ggcctgctgt ggtgctcgac 61 atcagtgaca gacggaagca gcagaccatc aaggctacgg gaggcccggg gcgcttgcga 121 agatgaagtt tggctgcctc tccttccggc agccttatgc tggctttgtc ttaaatggaa 181 tcaagactgt ggagacgcgc tggcgtcctc tgctgagcag ccagcggaac tgtaccatcg 241 ccgtccacat tgctcacagg gactgggaag gcgatgcctg tcgggagctg ctggtggaga 301 gactcgggat gactcctgct cagattcagg ccttgctcag gaaaggggaa aagtttggtc 361 gaggagtgat agcgggactc gttgacattg gggaaacttt gcaatgcccc gaagacttaa 421 ctcccgatga ggttgtggaa ctagaaaatc aagctgcact gaccaacctg aagcagaagt 481 acctgactgt gatttcaaac cccaggtggt tactggagcc catacctagg aaaggaggca 541 aggatgtatt ccaggtagac atcccagagc acctgatccc tttggggcat gaagtgtgac 601 aagtgtgggc tcctgaaagg aatgttccag agaaaccagc taaatcatgg caccttcaat 661 ttgccatcgt gacgcagacc tgtataaatt aggttaaaga tgaatttcca ctgctttgga 721 gagtcccacc cactaagcac tgtgcatgta aacaggttcc tttgctcaga tgaaggaagt 781 agggggtggg gctttccttg tgtgatgcct ccttaggcac acaggcaatg tctcaagtac 841 tttgacctta gggtagaagg caaagctgcc agtaaatgtc tcagcattgc tgctaatttt 901 ggtcctgcta gtttctggat tgtacaaata aatgtgttgt agatgaaaaa aaaaaaaaaa 961 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //